SILENT_MODE BLOCK_FILE jp_1D2stjz.concise.blc MAX_NSEQ 780 MAX_INPUT_LEN 782 OUTPUT_FILE jp_1D2stjz.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 427 769 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 770 427 779 H SPACE SUB_CHARS 1 770 427 779 E SPACE SUB_CHARS 1 770 427 779 - SPACE STRAND 3 773 6 COLOUR_TEXT_REGION 3 773 6 773 51 STRAND 13 773 20 COLOUR_TEXT_REGION 13 773 20 773 51 STRAND 26 773 31 COLOUR_TEXT_REGION 26 773 31 773 51 STRAND 35 773 40 COLOUR_TEXT_REGION 35 773 40 773 51 STRAND 45 773 48 COLOUR_TEXT_REGION 45 773 48 773 51 STRAND 63 773 68 COLOUR_TEXT_REGION 63 773 68 773 51 STRAND 75 773 79 COLOUR_TEXT_REGION 75 773 79 773 51 STRAND 90 773 94 COLOUR_TEXT_REGION 90 773 94 773 51 STRAND 101 773 102 COLOUR_TEXT_REGION 101 773 102 773 51 STRAND 121 773 126 COLOUR_TEXT_REGION 121 773 126 773 51 STRAND 132 773 136 COLOUR_TEXT_REGION 132 773 136 773 51 STRAND 142 773 145 COLOUR_TEXT_REGION 142 773 145 773 51 STRAND 152 773 153 COLOUR_TEXT_REGION 152 773 153 773 51 STRAND 167 773 174 COLOUR_TEXT_REGION 167 773 174 773 51 STRAND 180 773 185 COLOUR_TEXT_REGION 180 773 185 773 51 STRAND 190 773 194 COLOUR_TEXT_REGION 190 773 194 773 51 STRAND 200 773 203 COLOUR_TEXT_REGION 200 773 203 773 51 STRAND 226 773 229 COLOUR_TEXT_REGION 226 773 229 773 51 STRAND 232 773 235 COLOUR_TEXT_REGION 232 773 235 773 51 STRAND 241 773 245 COLOUR_TEXT_REGION 241 773 245 773 51 STRAND 258 773 262 COLOUR_TEXT_REGION 258 773 262 773 51 STRAND 269 773 272 COLOUR_TEXT_REGION 269 773 272 773 51 STRAND 295 773 300 COLOUR_TEXT_REGION 295 773 300 773 51 STRAND 306 773 311 COLOUR_TEXT_REGION 306 773 311 773 51 STRAND 322 773 326 COLOUR_TEXT_REGION 322 773 326 773 51 STRAND 333 773 334 COLOUR_TEXT_REGION 333 773 334 773 51 STRAND 346 773 351 COLOUR_TEXT_REGION 346 773 351 773 51 STRAND 356 773 360 COLOUR_TEXT_REGION 356 773 360 773 51 STRAND 365 773 369 COLOUR_TEXT_REGION 365 773 369 773 51 STRAND 375 773 376 COLOUR_TEXT_REGION 375 773 376 773 51 STRAND 393 773 399 COLOUR_TEXT_REGION 393 773 399 773 51 STRAND 406 773 410 COLOUR_TEXT_REGION 406 773 410 773 51 STRAND 415 773 419 COLOUR_TEXT_REGION 415 773 419 773 51 STRAND 2 778 5 COLOUR_TEXT_REGION 2 778 5 778 51 STRAND 14 778 20 COLOUR_TEXT_REGION 14 778 20 778 51 STRAND 26 778 31 COLOUR_TEXT_REGION 26 778 31 778 51 STRAND 35 778 40 COLOUR_TEXT_REGION 35 778 40 778 51 STRAND 46 778 48 COLOUR_TEXT_REGION 46 778 48 778 51 STRAND 62 778 68 COLOUR_TEXT_REGION 62 778 68 778 51 STRAND 75 778 79 COLOUR_TEXT_REGION 75 778 79 778 51 STRAND 90 778 94 COLOUR_TEXT_REGION 90 778 94 778 51 STRAND 101 778 103 COLOUR_TEXT_REGION 101 778 103 778 51 STRAND 121 778 126 COLOUR_TEXT_REGION 121 778 126 778 51 STRAND 132 778 137 COLOUR_TEXT_REGION 132 778 137 778 51 STRAND 142 778 145 COLOUR_TEXT_REGION 142 778 145 778 51 STRAND 152 778 153 COLOUR_TEXT_REGION 152 778 153 778 51 STRAND 168 778 174 COLOUR_TEXT_REGION 168 778 174 778 51 STRAND 180 778 185 COLOUR_TEXT_REGION 180 778 185 778 51 STRAND 190 778 194 COLOUR_TEXT_REGION 190 778 194 778 51 STRAND 201 778 203 COLOUR_TEXT_REGION 201 778 203 778 51 STRAND 226 778 229 COLOUR_TEXT_REGION 226 778 229 778 51 STRAND 232 778 234 COLOUR_TEXT_REGION 232 778 234 778 51 STRAND 241 778 245 COLOUR_TEXT_REGION 241 778 245 778 51 STRAND 259 778 262 COLOUR_TEXT_REGION 259 778 262 778 51 STRAND 269 778 271 COLOUR_TEXT_REGION 269 778 271 778 51 STRAND 295 778 299 COLOUR_TEXT_REGION 295 778 299 778 51 STRAND 306 778 311 COLOUR_TEXT_REGION 306 778 311 778 51 STRAND 322 778 326 COLOUR_TEXT_REGION 322 778 326 778 51 STRAND 333 778 335 COLOUR_TEXT_REGION 333 778 335 778 51 STRAND 345 778 351 COLOUR_TEXT_REGION 345 778 351 778 51 STRAND 356 778 360 COLOUR_TEXT_REGION 356 778 360 778 51 STRAND 365 778 369 COLOUR_TEXT_REGION 365 778 369 778 51 STRAND 375 778 377 COLOUR_TEXT_REGION 375 778 377 778 51 STRAND 394 778 399 COLOUR_TEXT_REGION 394 778 399 778 51 STRAND 406 778 410 COLOUR_TEXT_REGION 406 778 410 778 51 STRAND 415 778 419 COLOUR_TEXT_REGION 415 778 419 778 51 STRAND 3 779 6 COLOUR_TEXT_REGION 3 779 6 779 51 STRAND 13 779 20 COLOUR_TEXT_REGION 13 779 20 779 51 STRAND 26 779 31 COLOUR_TEXT_REGION 26 779 31 779 51 STRAND 35 779 39 COLOUR_TEXT_REGION 35 779 39 779 51 STRAND 45 779 48 COLOUR_TEXT_REGION 45 779 48 779 51 STRAND 64 779 68 COLOUR_TEXT_REGION 64 779 68 779 51 STRAND 75 779 80 COLOUR_TEXT_REGION 75 779 80 779 51 STRAND 89 779 94 COLOUR_TEXT_REGION 89 779 94 779 51 STRAND 121 779 126 COLOUR_TEXT_REGION 121 779 126 779 51 STRAND 132 779 136 COLOUR_TEXT_REGION 132 779 136 779 51 STRAND 142 779 144 COLOUR_TEXT_REGION 142 779 144 779 51 STRAND 153 779 154 COLOUR_TEXT_REGION 153 779 154 779 51 STRAND 167 779 174 COLOUR_TEXT_REGION 167 779 174 779 51 STRAND 180 779 185 COLOUR_TEXT_REGION 180 779 185 779 51 STRAND 190 779 194 COLOUR_TEXT_REGION 190 779 194 779 51 STRAND 200 779 203 COLOUR_TEXT_REGION 200 779 203 779 51 STRAND 226 779 229 COLOUR_TEXT_REGION 226 779 229 779 51 STRAND 232 779 235 COLOUR_TEXT_REGION 232 779 235 779 51 STRAND 240 779 246 COLOUR_TEXT_REGION 240 779 246 779 51 STRAND 258 779 262 COLOUR_TEXT_REGION 258 779 262 779 51 STRAND 269 779 272 COLOUR_TEXT_REGION 269 779 272 779 51 STRAND 295 779 301 COLOUR_TEXT_REGION 295 779 301 779 51 STRAND 306 779 311 COLOUR_TEXT_REGION 306 779 311 779 51 STRAND 322 779 326 COLOUR_TEXT_REGION 322 779 326 779 51 STRAND 347 779 351 COLOUR_TEXT_REGION 347 779 351 779 51 STRAND 357 779 360 COLOUR_TEXT_REGION 357 779 360 779 51 STRAND 365 779 368 COLOUR_TEXT_REGION 365 779 368 779 51 STRAND 392 779 399 COLOUR_TEXT_REGION 392 779 399 779 51 STRAND 406 779 411 COLOUR_TEXT_REGION 406 779 411 779 51 STRAND 415 779 418 COLOUR_TEXT_REGION 415 779 418 779 51