SILENT_MODE BLOCK_FILE jp_eldcVDz.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_eldcVDz.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 170 5 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 6 170 15 H SPACE SUB_CHARS 1 6 170 15 E SPACE SUB_CHARS 1 6 170 15 - SPACE STRAND 21 9 29 COLOUR_TEXT_REGION 21 9 29 9 51 STRAND 34 9 42 COLOUR_TEXT_REGION 34 9 42 9 51 STRAND 48 9 52 COLOUR_TEXT_REGION 48 9 52 9 51 STRAND 67 9 71 COLOUR_TEXT_REGION 67 9 71 9 51 STRAND 76 9 78 COLOUR_TEXT_REGION 76 9 78 9 51 STRAND 87 9 94 COLOUR_TEXT_REGION 87 9 94 9 51 STRAND 100 9 109 COLOUR_TEXT_REGION 100 9 109 9 51 STRAND 118 9 118 COLOUR_TEXT_REGION 118 9 118 9 51 STRAND 125 9 133 COLOUR_TEXT_REGION 125 9 133 9 51 STRAND 138 9 143 COLOUR_TEXT_REGION 138 9 143 9 51 STRAND 158 9 167 COLOUR_TEXT_REGION 158 9 167 9 51 HELIX 4 9 7 COLOUR_TEXT_REGION 4 9 7 9 50 HELIX 58 9 62 COLOUR_TEXT_REGION 58 9 62 9 50 STRAND 7 14 7 COLOUR_TEXT_REGION 7 14 7 14 51 STRAND 20 14 29 COLOUR_TEXT_REGION 20 14 29 14 51 STRAND 34 14 42 COLOUR_TEXT_REGION 34 14 42 14 51 STRAND 48 14 52 COLOUR_TEXT_REGION 48 14 52 14 51 STRAND 67 14 71 COLOUR_TEXT_REGION 67 14 71 14 51 STRAND 76 14 78 COLOUR_TEXT_REGION 76 14 78 14 51 STRAND 87 14 94 COLOUR_TEXT_REGION 87 14 94 14 51 STRAND 101 14 109 COLOUR_TEXT_REGION 101 14 109 14 51 STRAND 125 14 133 COLOUR_TEXT_REGION 125 14 133 14 51 STRAND 138 14 143 COLOUR_TEXT_REGION 138 14 143 14 51 STRAND 158 14 167 COLOUR_TEXT_REGION 158 14 167 14 51 HELIX 4 14 6 COLOUR_TEXT_REGION 4 14 6 14 50 HELIX 17 14 19 COLOUR_TEXT_REGION 17 14 19 14 50 HELIX 58 14 62 COLOUR_TEXT_REGION 58 14 62 14 50 STRAND 22 15 29 COLOUR_TEXT_REGION 22 15 29 15 51 STRAND 34 15 42 COLOUR_TEXT_REGION 34 15 42 15 51 STRAND 47 15 52 COLOUR_TEXT_REGION 47 15 52 15 51 STRAND 61 15 62 COLOUR_TEXT_REGION 61 15 62 15 51 STRAND 67 15 72 COLOUR_TEXT_REGION 67 15 72 15 51 STRAND 76 15 78 COLOUR_TEXT_REGION 76 15 78 15 51 STRAND 86 15 93 COLOUR_TEXT_REGION 86 15 93 15 51 STRAND 100 15 109 COLOUR_TEXT_REGION 100 15 109 15 51 STRAND 118 15 119 COLOUR_TEXT_REGION 118 15 119 15 51 STRAND 125 15 132 COLOUR_TEXT_REGION 125 15 132 15 51 STRAND 139 15 143 COLOUR_TEXT_REGION 139 15 143 15 51 STRAND 158 15 167 COLOUR_TEXT_REGION 158 15 167 15 51 HELIX 4 15 7 COLOUR_TEXT_REGION 4 15 7 15 50 HELIX 60 15 60 COLOUR_TEXT_REGION 60 15 60 15 50