Jpred secondary structure prediction results

QUERY           : TVTKTIETHTDNIETNMDENLRIPVTAEVGSGYFKMTDVSFDSDTLGKIKIRNGKSDAQMKEEDADLVITPVEGRALEVTVGQNLTFEGTFKVWNNTSRKINITGMQMVPKINPSKAFVGSSNTSSFTPVSIDEDEVGTFVCGTTFGAPIAATAGGNLFDMYVHVTYSGT : QUERY 
UniRef90_Q77JA7 : ------------------EIINLTINGVARGNHFNFVNGTLQTRNYGKVYVAQGTSDSELVKKKGDIILTSLLGHTLNVNKAESKELELYARVYNNTKRDITVDSVSLSPGLNATREFSANKFVLYFKPTVLKKNRINTLVFGATFDEDIDDTNRHYLLSM--------- : UniRef90_Q77JA7

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161------- :
OrigSeq         : TVTKTIETHTDNIETNMDENLRIPVTAEVGSGYFKMTDVSFDSDTLGKIKIRNGKSDAQMKEEDADLVITPVEGRALEVTVGQNLTFEGTFKVWNNTSRKINITGMQMVPKINPSKAFVGSSNTSSFTPVSIDEDEVGTFVCGTTFGAPIAATAGGNLFDMYVHVTYSGT : OrigSeq

Jnet            : ---HHHH-------------EEEEEEEEE----EEEEEEEEE-----EEEEE-----HHHHH----EEEEE----EEE--------EEEEEEEE-----EEEEEEEEEE--------E------EEEEEEEEE----EEEEEE--------------EEEEEEEEEE--- : Jnet
jhmm            : ---HHHE---------HHHEEEEEEEEEE----EEEEEEEEE-----EEEEE-----HHHHH----EEEEE----EEE--------EEEEEEEE------EEEEEEEEE---------------EEEEEEEEE----EEEEEE--------------EEEEEEEEEE--- : jhmm
jpssm           : ---HHHH--------------EEEEEEEE----EEEEEEEEE----EEEEEE-------HEE----EEEEEE---EEE-------EEEEEEEE------EEEEEEEEEE--------EE-----EEEEEEEE------EEEEE--------------EEEEEEEEEE--- : jpssm

Lupas 14        : -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21        : -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28        : -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25         : -----B------B---B---B-BBBBB-B--BBB-BB-BBB-B--BB-BBB--B-----B----B-BBBBBB-B--B-B-------B-BBB-BB--B---B-B-BB-BB--B-----B-B--BBBBB-B-BB----BBBBBBBBBB---B-----BBBBBBBBBBB---- : Jnet_25
Jnet_5          : --------------------B-B-B--------B-BB---------B-B-B---------------BBB---------------------B-B--------------B----------------------------B--BBBB------B-------BB-BBB------- : Jnet_5
Jnet_0          : ----------------------B-------------------------B------------------B------------------------------------------------------------------------B-B-----------------B--------- : Jnet_0
Jnet Rel        : 98232214677754564442157888861688558999999648872788615777512021578548887146526526677630677666327887328863278862677763110157745888678626773068860477776666667643678889971799 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.