QUERY : TRINLTLVSELADQHLMAEYRELPRVFGAVRKHVANGKRVRDFKISPTFILGAGHVTFFYDKLEFLRKRQIELIAECLKRGFNIKDTTVQDISDIPQEFRGDYIPHEASIAISQARLDEKIAQRPTWYKYYGKAIYA : QUERY
UniRef90_E3SFL4 : TRINLTLVSELADQHLMAEYRELPRVFGAVRKHVQNGKKVSDFKIPSSFLLGTGHVTFFYDKLLFLKNRHQELIAECLKRGFNIKDISTQDLNDIPDEWKNDYQPSIWSIKISQARLNEKISQKPTWYKYYGKAVYA : UniRef90_E3SFL4
UniRef90_K4F7U4 : TRINLVPVQELADQHLMAEYRELPRVFGAVQKHIDAGKKIKDFKISPTYILGTGHVTFFYDKLLYLSNRHEQIVLECLKRGINISNIEKYNISHFPSVWCNDYEPSEQEIEISRARLIEKLILKPKWYKFSTDSV-- : UniRef90_K4F7U4
UniRef90_L7TJ72 : TRINLVHVKELADQHLMAEYRELPRVFGAVQKHVQARKRVRDFKINSTYLLGSGHVTFFYDKLLYLQKRHIDIVNECLRRGMKIQNTEVNDISSFPAEFCNDYVPSESEIKTSRERLIEKLQMKPKWYKFTD----- : UniRef90_L7TJ72
UniRef90_M5JMU0 : TRINCVDPSELTGPHLIAEYRELPRVFALVRSAIERGEAPTDARNPSVYTLGKGHVRFFYPRLGYLAKRQAAIIDEMLARGYSPQFTNIDQLDGFPDVWCNDWEPTEDAVAINRARISERLAKRP------------ : UniRef90_M5JMU0
UniRef90_F5S8W2 : TRINLVPPTELCDQHLLAEHRELTRIPNAVAKGKFS-----LVGQPADYKLGEGHVRFFFNKLRFLQKRYALLHEECLARGFNVQNRWAEQLPSNP-ELWQDYTPTEIALAINRERIAERMPQKARFTPH------- : UniRef90_F5S8W2
UniRef90_E7RX85 : TRINLVDPSELCDQHLLAEHRELTRIPNAVARG-----RFNLVGQPADYKLGEGHVRFFFDKLAFLQRRYAALHEECLARGFRVQNIWPQDLPDTPSLW-RDYQPTEQALALNRERITARMPAKARFTP-------- : UniRef90_E7RX85
UniRef90_C9PQ96 : TRINLIPVDELCDQHLLAEHRELTRIPNAVAKGKFN-----LAGQPDDYKLGSGHVRFFFNKLAFLKRRYDLLHQECLARGFNVKYIWPTDLPEDPLLWL-DYEPTQNALEANKTRIEERMPAKPRFTQ-------- : UniRef90_C9PQ96
UniRef90_C6AQX9 : TRINLVPPSELCDQHLLAEHRELTRIPNAVAKGKFHLK-----GQPTEYKLGEGHVRFFFNKMAFLKKRYGALHAECRVRGFNVTYIWPQELSTDPALWL-DYIPTEQALATNRQRIEERMPAKARFT--------- : UniRef90_C6AQX9
UniRef90_M1HYB6 : TRINLVPVTELANQHIFAEWREIKMVPKALSRSLRTQSADKVAKIPAKFTLNTGHVLFFYDKGAYLRKRYAELTAELVRRGFKINVDAPLDPEGDSAPWNNDYEPTEEAIKIIRQRISEKIAMKPGWYKFFDTP--- : UniRef90_M1HYB6
UniRef90_A6UEX8 : TRINCIPPSELSGPHLVAEYRELPRIFALVRGAIARGEEPNDRRNPEFYTLGKGHVRFFYSRLGYLAERQAALIAEMQRRGYMPSFLDPNGLEGIPPEWCNEWEPTPDAMALNRERISERVSQ-------------- : UniRef90_A6UEX8
UniRef90_A0A024KHQ2 : TRINCVPPSELTVQHLVAEYRELPRIFALVRAAIARGERPDDTRNPTEYRLGPGHVRFFYPRLLYLARRQASLIAEMQSRGYRPAFTDPAGLAGIPTEWCNDWQPTPEAQAANRARISERLA--------------- : UniRef90_A0A024KHQ2
UniRef90_C9TZE4 : TRINCIPPAELTGPHLVAEYRELPRVFALVRAAIQRGEAPQDSRNPQQYTLGAGHVRFFYARLGYLAKRQAALIAEMQARGYAPQFTNIEELIGIPLEWRADWEPTAEAIAINRARIAERL---------------- : UniRef90_C9TZE4
UniRef90_S5Y8W1 : TRINCIPPEELTGPHLVAEYRELPRIFTLVRAAIARGERPSDPRNPRDYRLGAGHVRFFYPRLGYLAQRQAALVAEMLRRGYAPGFTETAHLDGIAPEWCQDWEPTAPAQALNRARIAERLA-KPK----------- : UniRef90_S5Y8W1
UniRef90_Q9WH51 : TRVNLVPVQELADQHLMAEFRELKMIPKALARSLRTQSPEKVLKIPSKFTLNKGHVMFFYDKGKYLQNRYDEIVVELVARGYKINVDAKLDPDNMVGEFYNDYTPTEDAFNIIRTRIAEKIAMKPNWYRFTK----- : UniRef90_Q9WH51
UniRef90_UPI0003A06549 : TRINCIPPQELTGPHLVAEYRELPRIFTLARAAIERGEKPDDPRNPRSYTLGKGHVRFFYPRLGFLVQRQQALIDEMLRRGYQPSYQSTAHLEGIPQHWCADWQPDEAAITINKARIAERLN-KPN----------- : UniRef90_UPI0003A06549
UniRef90_M1GYY3 : TRINLVSPSELANEHVFAEWREIKMVPKALARSLRTQSSDKVAKIPNKFTLNTGHVLFFYDKGAYLRKRYQELTEELEKRGYNFNRDAEFDPDGIADQWNGDYTPTEEAYTIIRARIAEKIAMKPDFY-HFGQVVKA : UniRef90_M1GYY3
UniRef90_W0QB30 : -----MSPAELCDQYLLAEHRELTRIPNAVAKGKFSLK-----GQPADYKLGEGHVRFFFNKLTFLKKRYDALHEECLARGFNVQYFWAEDLPQDPSLWL-DYEPTETALAVNRERIEIRMPAKPRFT--------- : UniRef90_W0QB30
UniRef90_UPI0003F6C795 : TRINIIPPEELCDQHLLAEHRELTRIPNDIAK--RQGKVP--LSNAPGYHLGTGHVTFFRDKLRFLKDRYDALHQECLKRGFNVLYKWPEDVAEYLHLW-NDYEVTAQDRAINMARIIERMPEKPRYTPH------- : UniRef90_UPI0003F6C795
UniRef90_D2TYX1 : TRINVIPPNELCDQHLLAEHRELTRIPNYIVK--KEGHVV--LSTLTSYTLGKGHVLFFRDKLLFLYLRYTSLHQECLNRGFSVTNKWPAKVKNYSHLWNN-YQVTELDIMINKARIAERMPLKPRFTSHKNNII-- : UniRef90_D2TYX1
UniRef90_Q7TV95 : TRINLINPSELSDQHLIAEYREIFMIGSALQRSIKSKTWEKTKKNPKEFTLNIGHVKFFYNKGKYLHKRYIKLIDEMKCRGMNPNPERQFKKEQWPNDFYKDWGPSAQDIKLIRKRIKEKINQKPNWYRWTKK---- : UniRef90_Q7TV95
UniRef90_G8DF23 : TRINVVPPTELTNKHLMAEYRELPRIFTEVKKKVNTGISVNDLTQPDHYKMGQGHVMFFMSRCGWLVHRYVTLYDELVNRGYSLNDDIVNGVNDIPVEFLDWYEPTDSAMTVNRARILERLS--------------- : UniRef90_G8DF23
UniRef90_L2F625 : TRINVIDVNELTDQHLFAEYREITRIFTLVNQACKKHPVSAILKIPPTYRMSTGHVLFFYDKLNFIEQRYFHLRHEVLKRGFNVKDDIVAFRTLIDPRFYQDFHPTKTDIAVNIGRLLEKIHAKPNWYKIHGNLI-- : UniRef90_L2F625
UniRef90_A9BBB4 : TRINLVKPIELSDQHLIAEYREIFMIGSALQRSMKSPNWITKESLPKNFTLNTGHVRFFYNKGKYLYKRYLDIIEEMKRRGMNPNPRRLFNKEQWPDELYNDWTPNEIDIQVVKERIKEKINQKPHWYRWT------ : UniRef90_A9BBB4
UniRef90_K0MX78 : TRINCVPVEELSGPHLVAEYRELPRVFALAQKAAARGGLV----QPAAYTLGKGHLLFFYTRLGYLARRHRALVEEMRRRGYRPAFAGVEDFPDIPAPFWSDWTPTEEALALNRARIAAR----------------- : UniRef90_K0MX78
UniRef90_UPI0003803F8A : TRINCIPVEELSGPHLVAEYRELPRVFALAEKAAQR----KSFEQPERYTLGKGHMLFFYTRLGYLVKRHAELIQEMKRRNYNPSFNGVEDFPNIPDHFWKDWVPTAEAQAINRQRIKER----------------- : UniRef90_UPI0003803F8A
UniRef90_F4YXR7 : TRINCVPVEELTGPHLVAEYRELPRVFKLMRAAQARGENIRDPRNPRRYVLGTGHVRFFYDKGLYLLRRQKALVAEMQRRGYNPTYTDPAELPDGLDLWMMDWAPDAEALKLNRQRIAERTAA-------------- : UniRef90_F4YXR7
UniRef90_A0A023NGV8 : TRINLIDPSLLTDQHLLAEHRETTRIPNTIKSGKAKVDKVSLAKTPYKYTLGTGHIKYFYRKLSWLKKRYEDVTEECIRRGFNVKNIWPEGLEDFPHLFLDRDVVTEESLKINVERVLLRFPKSAR----------- : UniRef90_A0A023NGV8
UniRef90_M1HWU6 : TRVNLVQVSELADQHAFSEFREIKMIPKALARSLRTQSVEKILKIPKKFTLNTGHVLFFYNKGSYLRRRYNELTEDLKKRGYNIDENAKFDPDGIMDPWNGEYKPTDEAFDIIRRRIDEKIAMKPEWYRFF------ : UniRef90_M1HWU6
UniRef90_D4G8V4 : TRINVVQPIELCDQHLLAENMEIIRIPNYVIKKFGLVKISKV----SQYILGKGHVIFFRDKLLFLYKRYMLLQKECINRGFKVNFRWPKSVIQYVSLW-KDYKVTECDIKKNRIRIYEKMPPKPRF---------- : UniRef90_D4G8V4
UniRef90_Q56C32 : TRINTIDPSLLLNEHLIAELRELPRIPNAVLSGKA---KINLSKIPAVYTLGTGHVTFFYNKLGYLRDRHAALRAEYLARGKEYMDGTYEDFDLSPLHLCADWKPTPESVKINVERIRERFELRKRAYRFGTEII-- : UniRef90_Q56C32
UniRef90_M4QUK4 : TRINTIKPSDILDQHLIAEWRELPRIPN----SILSGKAKLDLKIPDQYKLGQNHVRFFYNKLSYLQKRHTMICEEMDRRSINRDKSITVDLTSLNLVLCNDWQPTSRDHNINIERLQERFDLRKRAYHLTT----- : UniRef90_M4QUK4
UniRef90_X0YFN3 : TRINVVPVQELTNKHLMAEYRELPRSMRRAVLAAYKGKQPGDVKIAPEYKLGTGHELFFVDKCKWLYDRWVLLRDELLKRGYNLSDQFQQHIRKHAKQFYGEYLPTGNARMINRQRIAERLS--------------- : UniRef90_X0YFN3
UniRef90_R9TFK5 : TRINCMPVETLSDKHLLAEYKEITRPFSKVEARIAN-DTMTNLKIPEHYVLGTGHETFFFDKLHYLYLRYQDLCEELIHRGVNIDMTKFNDICNWDTAYWNYWVPRPEDMYLNMARLVKR----------------- : UniRef90_R9TFK5
UniRef90_E1XTC8 : TRINVIPVESLCDQHLLAEYKEL----APVVLNVVNGKRRNLKGAPKHYKLNEGHVLFFRDKLVYLIQRYDQLVAELLSRGYTVNYPSLRNTPDNKQEYLNDYQPTQAAVEENVERIVERLN--------------- : UniRef90_E1XTC8
UniRef90_Q56EY3 : TRINLEHPSLLCNAHLVGEWYENPRVATLLKKNGRTGKIPKRFRTNKNPDGGRGHVTFFYNKLAWLRDRYLMLMDEMTKRGYSPTDNWKVEIPEYTHLF-GEWTPTEADISLSRTRIAEMIPEK------------- : UniRef90_Q56EY3
UniRef90_M1GXH5 : ------------------------MVPKALARSLRTQSADKVAKIPAKFTMNTGHVLFFYNKGMYLHKRYAELTAELVRRGFKINVDAPLDPEGDSAPWNDDYIPTEEALAIIRQRIAEKIAMKPLFYKFFDAP--- : UniRef90_M1GXH5
UniRef90_M4MC45 : TRINTVKPEHLTNEWLLAEWRELPRIANELEKHPQR---FKLEDIPPQFKLDTGHVKFFRNKLLFLAKRHRELKRELRKRGIKHDKKIRVELPHIKMFGCNDWEASQRDHGILVERLEERFDLRKKAY--------- : UniRef90_M4MC45
UniRef90_D9PM99 : TRINVINPKDLIREHLIAEHREIKRIPNMIVSGKAIIKN-----IPNEFTLGEGHVKFFYNKLNYLLKRYRLLYKECKKRNYKVQNYE-NAWNNIPKELMNNWKPKDKDINLIRKRLEEKLNKK------------- : UniRef90_D9PM99
UniRef90_M1HBN2 : -----------------------------------------------------GHVLFFYDKGAYLHKRYAELTAELVRRGFKINVNAPLDPEGDAAPWNKDYEPTEEALAIIRQRIAEKIAMKPTWYKFFDKP--- : UniRef90_M1HBN2
UniRef90_S4T813 : ----------LLDQHLFIAYREVTRISTAARLLLPSEEV-------PAYVMGAGHMKFFYDKGKFLARQCEELYQACITRGPNITHKTYKPHPEYPVSLNNDWQPDRQAHLASLIRLHEKLQDKPNFYTLNGKPV-- : UniRef90_S4T813
UniRef90_C4WNE1 : --------------------------------------------------MGKGHVRFFYPRLGYLAKRQAAIIDEMLARGYSPQFTNIDQLDGFPDVWCNDWEPTEDAVAINRARISERLAKRP------------ : UniRef90_C4WNE1
UniRef90_K1ZHC2 : -RVWDIHPKHLCRKHLLAEHRELHGLWNILTKHKGVGGYSKHPET-----------LRWAGKTKALYGRHEMLVEEFTRRGYNH----------------------------------------------------- : UniRef90_K1ZHC2
UniRef90_D7EAE8 : -RIWDIPPDKLCRNHLLGEHRELHALWSIII------NNKKAYSNHPE-------TLRWKDKLRALHLRHEKLVEEMDKRGYNHQDVRFATGSDTQDEFIDSYE--------------------------------- : UniRef90_D7EAE8
UniRef90_A9A2F4 : -RIWDIPPKKLCRNHLLGEHRELHAMWAVITEGK------------KGYSLHPETVR-WKGKLKALYSRHEELVSEMTRRGYSHQ---------------------------------------------------- : UniRef90_A9A2F4
UniRef90_G1UNN1 : -RMWLVPPSHMCRKHLLGEHVELHMLLGTLKK----GKSITGF-------LSGGLI----DPCR-MYKRHGELVREMERRGYAHNSPLTEEEC---TEALRDYDCSTAHIDINRRRCRE------------------ : UniRef90_G1UNN1
UniRef90_D1C6C4 : -RIWDLPPECLCRQHLLGEHRELHALW-----SVLTEGKPGFANHPET--------RRWRGKLKALFLRHDQLVAEMQRRGYQHRSPLPAALATGAAV-QTEYVDTPEEQ---RRLLREK----------------- : UniRef90_D1C6C4
UniRef90_Q46F38 : -RIWDIPPEKMCRQHLLGEHRELHALWSIIT------NNKKAYAHHPE-------TMRWRGKLKALYLRHEALVEEMTRRGYKPLDPALATGKAVQDEFVDSY---EEQVQLLKER--------------------- : UniRef90_Q46F38
UniRef90_B3DWN8 : -RIWDIEPQKLCNKHLLGEHRELHALWTILVQSK------KGYANHPETK-------RWRGKLKALFLRHEQLVKEMVRRGYKHKSPLDQNLSGIQDQF-------------------------------------- : UniRef90_B3DWN8
UniRef90_K2GB85 : -RVWDVDPKKLCQEHLVAEHRELHGLWNILTKHGGKGGYSKHPET-----------LRWVGKNRALFERHEVLIREFEKRGYKH----------------------------------------------------- : UniRef90_K2GB85
UniRef90_K0B9S7 : -RIWDISPNLLCRNHLLGEHRELHAMWVIITEKK------------KGYSLHPETLR-WYGKLNALYLRHELLANEMCSRGYNHKDKRKATGKSLQDVFIDD----------------------------------- : UniRef90_K0B9S7
UniRef90_Q8TIS2 : ----------MCRQHLLGEHRELHALWSIIT------NDKKAYAHHPE-------TLRWKGKLKALYLRHEALVEEMGRRGYNPLDPALATGKAVQDEFVDSYE--------------------------------- : UniRef90_Q8TIS2
UniRef90_UPI0003B691A4 : -RIWDIDPGFLNDQSLLGEHRELHGLVSI------------HVNQKKGYSRHPETLRWTKA-LTGLYLRHEILVQEMGLRGFRHNSPIERPGEGWPDTFID------------------------------------ : UniRef90_UPI0003B691A4
UniRef90_UPI00037CB85B : -RIWDLHPGYLNRQSLLGEHRELHGMVSIIVNHK------------KGYSRHPETLR-WTGFGWALNKRHQLLAAEMKLRGYNDKVRTRKNKGLWPDSFID--EPYVQ-IRLLREKYQDKIPGR------------- : UniRef90_UPI00037CB85B
UniRef90_H5SH11 : -RIWDISPGYLNRNSLLGEHNELHALVSI------CLNNKKGYAHHPE-------TLRWKDYLGALAVRHELLVAEMTLRGYAHQSPLSVEP--DPTRWPVQYVPPARQFALLREKYRAREPGR------------- : UniRef90_H5SH11
UniRef90_Q0EZF3 : -RIWDLHPGYLDRKRLLGEHRELHGLVNIISQGKR------------GYARHPETLR-WVGHLPALCTRHQLLVSEMMLRGYNHHSPVPENPPGWPDIFID------------------------------------ : UniRef90_Q0EZF3
UniRef90_I5AY68 : -RIWDLHPGYLNRQSLLGEHRELHGMVSIIVNGK------------KGYSRHPETLR-WMDFGWALNKRHQLLSAEMKLRGYN--DKSPVQIQDNNGMW-------------------------------------- : UniRef90_I5AY68
UniRef90_D6Z023 : -RVWDIHPGYLNRQSLLGEHRELHGIVAIISQGK------KGYANHPE-------TRRWQSYGWALQQRHRLLACEMALRGF--TDRSPVALTNWPAVYLDE----------------------------------- : UniRef90_D6Z023
UniRef90_UPI00035C9BA7 : -RVWDIHPGYLSTRSLLGEHAEIHALYSIISK------KKSGYSRHPETRRWTGH-------LEFLILRHDLILKEMTLRGFKH----------------------------------------------------- : UniRef90_UPI00035C9BA7
UniRef90_Q6AQB4 : -RIWDIDPGYLNRQSLLGEHFELHGIVSIIV------------NNKKGYSRHPETVR-WLEHGWALGKRHLQLAVEMSLRGYREKDQWPENYIDEP----------------------------------------- : UniRef90_Q6AQB4
UniRef90_M0M868 : --MWCVPVGILCKQHLAGEHAEHHQLEGTILRH------PHGEAIAE------GHAERGNIDTTRLEERHDDLAAEMERRGMNHDSPLDYDGPTFGA--------GAIDVERNREDLLER----------------- : UniRef90_M0M868
UniRef90_C0GFI4 : -RVWDIHPGYLSRQSLLGQHAEIHAIINIIV------NKKRGYAAHPETK-------RWKENLVPLVARHDLTVKEMRLRKFKH----------------------------------------------------- : UniRef90_C0GFI4
UniRef90_M1Q7X0 : ----------------------MHALWSIIT------NSKKAYAHHPE-------TLRWRGKLKALYLRHEALVREMTKRGYKPLDPALATGKAVQDEFVNTY---EEQVRILKER--------------------- : UniRef90_M1Q7X0
UniRef90_M0MVK9 : --MWCLPTEILCDDHLRGEHAEHHQLVGTIRNH------PHGEAIAE------GHAEKGNIDTTRLEERHARLAAEMERRDMNHDSPLAYDGP-------------------------------------------- : UniRef90_M0MVK9
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131---- :
OrigSeq : TRINLTLVSELADQHLMAEYRELPRVFGAVRKHVANGKRVRDFKISPTFILGAGHVTFFYDKLEFLRKRQIELIAECLKRGFNIKDTTVQDISDIPQEFRGDYIPHEASIAISQARLDEKIAQRPTWYKYYGKAIYA : OrigSeq
Jnet : -------------HHHHHHHHH-HHHHHHHHHH----------------------EEEE---HHHHHHHHHHHHHHHHH---------------------------HHHHHHHHHHHHHHH---------------- : Jnet
jhmm : -------------HHHHHHHHH-HHHHHHHHH----------------------EEEEHH-HHHHHHHHHHHHHHHHHH---------------------------HHHHHHHHHHHHHHH---------------- : jhmm
jpssm : -------------HHHHHHHHH--HHHHHHHHHH---------------------EEEE---HHHHHHHHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHH----EEE----EE-- : jpssm
Lupas 14 : ----------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ----------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ----------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : -BBBBB-B--BB--BBBBBBB-B-BBB-BB---B--------B-BB--B-B---BBBBBB--B-BB--BB--BB-BB--BBB-B---B---B--BB--BB--B-B---BB-BBB-BB---B---B-BB-B----B-- : Jnet_25
Jnet_5 : --B----B--B----B-BB------B---B-------------------------B--B---B--B---B--B---B---------------------B-----B-------B---B-------------------- : Jnet_5
Jnet_0 : ---------------B-------------B-----------------------------------B------B---B------------------------------------------------------------ : Jnet_0
Jnet Rel : 99888775552214553453311222899998223677777777776654577714762271689999999999998752677777777777777766677777627899999999999860478521347741068 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.