QUERY : TAIEKALDFIGGMNTSASVPHSMDESTAKGILKYLHDLGVPVSPEVVVARGEQEGWNPEFTKKVAGWAEKVASGNRILIKNPEYFSTYMQEQLKELV : QUERY
UniRef90_G0E2Y5 : -VIDKALDFINGMNTSSSAPHTMDESTAKGIFKYLNELGAPASAADVYARGTQEGWDPEFTKTLAGWAERIESGERIVIKNPEYFSSYMREELRALV : UniRef90_G0E2Y5
UniRef90_S3J7Q4 : -VIDKALDFIGGMNTSASAPHPMDESTAKEMLKYLKQLGVPASAAEITARGTQEGWNAEFTKKLASWADKIEAGDRVIAKHPEYFSSYMKEELRALV : UniRef90_S3J7Q4
UniRef90_A4WEQ0 : -VIDKALDFIGGMDTSASAPQSMDESTAKGMFKYLKEIGVPASADDVTARGTQEGWDAGFTQKVAGWAEKIESGSHIVIKNPEYFSAYMREQLRALV : UniRef90_A4WEQ0
UniRef90_W9B350 : -VIDKALDFIGGMNTSEPVPQSMDESTAKGILKYLKELGVPATPADVAARGQQQGWSAGFTDKVAEWAERVAAGERLVIKHPEFFSTYMREELRALV : UniRef90_W9B350
UniRef90_B7LPN9 : -VIDKALDFIGAMDISASTPSSMNESTAKGIFKCLKDLGVPASADDIIARGNEEGWNPEFTQKMVRWAKKMESGERVVIKNPEYFTSYMHDELKALV : UniRef90_B7LPN9
UniRef90_G8WI42 : TAIDKALDFIGGMNTSLSVPNTMDESTAKGILKYLHELGVPANPADVMARGEKEGWDAGFTEKVAGWAEKIASGNRIVIKNPEFFTVYMREQLQALV : UniRef90_G8WI42
UniRef90_L0LYE6 : TVIAKALDFINAMDTTVAVPHSMDESTAKGIFKYLKEIGVQVSAEEITARGTSEGWNPEFTKKVVGWADKIASDERIVIKNPEYFSSYMQEQLSALV : UniRef90_L0LYE6
UniRef90_UPI000308AD7B : -IIDKALDYIDSMNTSSSAPHPVDESCAKELFKFINKLGQPISGVYIHNYGAQNGWNSGFTKKMAEWADKVAAGGRVQVKHPGYLSENIQEELRSLL : UniRef90_UPI000308AD7B
UniRef90_W8UDY3 : -ILEKAFEYIDGMNTSVSAPHPVDESRAKELLKFLKDEGVTFEGHEILAWGNRNGWDHGFTKKLAGWADKIHSGGRVVIKHPGYLSDELVKDLRSL- : UniRef90_W8UDY3
UniRef90_A0A029NZN5 : -------------------------AASPGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMETGERSVIKNPEYFSTYMQEELKALV : UniRef90_A0A029NZN5
UniRef90_U7QUG2 : -IFKRTLENFNSLNTSVSSPHPSDESYIKEILKFLKNEGNELTSNDIFTWGSSHNWDNQFTKKVSDWADKINSGGRVIIKHPRLGEKFKQE-LRSL- : UniRef90_U7QUG2
UniRef90_H5LMK1 : -VIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEK---WLDGQKNGDR--------------------- : UniRef90_H5LMK1
UniRef90_N8X9I3 : --VQAALEALNRVNVSAGATHPLDDSIKKSVFKWLKNQGETLDQDEINEWALNNDWSDRHAVELGKLAQKIGEGARVQIKYPDRVSEEFFNRIR--- : UniRef90_N8X9I3
UniRef90_N1NQR2 : ---ELVLQNFNALNINTSALHSSDECRIKDTLKFLKKENCELSSQSLNDWAVLNGWDPKFTKKVNEWLLKINSGGRVVIKHKNYGSDSFKKEL---- : UniRef90_N1NQR2
UniRef90_R4Y7B2 : ---------------------------------YLKELGVPATPADVAARGQQQGWSAGFTDKVAEWAERVAAGERLVIKHPEFFSTYMREELRALV : UniRef90_R4Y7B2
UniRef90_UPI00034DA517 : SIVKDCIETLSKVNVSTGLAHPLDDSRAKELFKALHAKGVVLDEDEIYDIAIANGWKDSHAKKLSQLAEKIGNGGRVVIKHPR-------------- : UniRef90_UPI00034DA517
UniRef90_B5N2Z3 : ----------------------------------MYDLGVPVSPEVVVARGEQEGWNPEFTKKVAGWAEKVASGNRILIKNPEYFSTYMQEQLKELV : UniRef90_B5N2Z3
UniRef90_N6WXF2 : -------------NVSAGLAHPVDEARAKELFKALHKQGIPLSMDDVYTLAIENQWSDRHATDLAKLADKIGSGGRVQIKHPK-------------- : UniRef90_N6WXF2
UniRef90_X6DC41 : -VFVRAIETLSSMNLSTGLGHPRDKAMANEIMRILRTKGHSDQSANIKSWAIRRGWRPDHAADLEALARKI-------------------------- : UniRef90_X6DC41
UniRef90_M4ICQ2 : SVVANALKALSGINLSHAVMNPRDKEHADETLRILRAKGHQLEPEQIKSWAIRNGWKPGAADELAKLATRI-------------------------- : UniRef90_M4ICQ2
UniRef90_W1RRT9 : -VIENGLRALSRMNLAHGSLHPRDKQYADETLRILRAKGHSAPTGDIRSWAIREGWKPGAADDLAKLAEKI-------------------------- : UniRef90_W1RRT9
UniRef90_N8W794 : --IEEALSRLTKVNLSTGLVHPSDKEFAKRIFLKLKNEGHQIEPEDVKFWAIKNGWQARHAKELKKLATK--------------------------- : UniRef90_N8W794
UniRef90_UPI0004025256 : ----KALS--GSLTPANGLTHPVDDSKAKCLFKALHKKGIALSEDEVLLLAIENNWPEKHAKKLADIAQRINDGRRVKI------------------ : UniRef90_UPI0004025256
UniRef90_F2ZCU8 : -VVVKAMESLTRVNPSNPLSHPNDKERAVRTLKILRRKNHSLDADDIRAWAVAHGWKPDAADELAVLAIKIA------------------------- : UniRef90_F2ZCU8
UniRef90_L9XL66 : -VVKEALESLHMMNVSSGLTQSSDRSKAIEMFRIIHQNGHQFDPTTIRAWVSQKGWQPGNADEVQGVAEDVLAGKQLQ------------------- : UniRef90_L9XL66
UniRef90_UPI00036A6206 : -------------NASSRIVSATDESKAKELLKAFQQRGITLMPDVMQQQAEALGWESRYAKILAKLAVQIGNGGRVVIKQP--------------- : UniRef90_UPI00036A6206
UniRef90_S5FAD8 : --IVQSLTNLTAINLSTGLSHPSDKKHAEQIFKELSQKGYKADEEQIASWAIAHGWNASHLSDLKKLVRRYLS------------------------ : UniRef90_S5FAD8
UniRef90_V9H885 : --VEEVLRRLNVVNLTTGLAHPSDKKSAINEFKKLKQLGIKENPEYIGNWALANGWNARHIDDLKKLATQ--------------------------- : UniRef90_V9H885
UniRef90_Z5RXP9 : ------------INMSTGLSHPSDKDRAKRIFAGLKKQGLKASEEAIRQFAVNNGWAPVRAQELASFAKK--------------------------- : UniRef90_Z5RXP9
UniRef90_UPI0004635545 : -VVEQAMKSLTSVNRAHNVLHPGDEDHTKRILRILRSNNHQESAENIKLWAIKNGWLPKAAERLAVLADK-AFALRTKPKNPEHASKLYQ------- : UniRef90_UPI0004635545
UniRef90_K8PSJ5 : --VEEALQNLTSINLGTGLSHPLDKKRAERTIAQLRQEGHLFDPVEIRRWAQRNGWTSSAAASLEAVARK--------------------------- : UniRef90_K8PSJ5
UniRef90_UPI0003448DD6 : -VVEQAMKSLNIINKAHNSLHPSDEEHAKRILRILRSREHLEPAENIRRWAIKNGWLPKAAERLEVLAQK--------------------------- : UniRef90_UPI0003448DD6
UniRef90_UPI00046D4CEE : -IVEQAMKSLTSVNRGTAVLNGSDEDHAKRILRILRAHNHQEPAENIKLWAINNGWLPKTAERLETLAEK--------------------------- : UniRef90_UPI00046D4CEE
UniRef90_W6VTX7 : -VVEQAMKSLTVVNRANNTMHTADEDYAKRIFRILRAHNHREPAENIKLWAISDGWLPKTAERLEVLAQK--------------------------- : UniRef90_W6VTX7
UniRef90_E6LYJ2 : --VIEGLQRITSINHNNSVAGTGYEKTVRELLR-LHDAGYALPPKRMAQWASAHGWIHENSKELANWAKKISSGSR--------------------- : UniRef90_E6LYJ2
UniRef90_J2YRK5 : -AIVDALERITQMNHNNTIAAGRDKRDVVRPLLRLHDEGIVLPPKKMAEWAVAHGWRRGNPKELIDLAKKINKGVR--------------------- : UniRef90_J2YRK5
UniRef90_UPI00035E69EE : -IVMEALKSLTAMNHNNTISAGSEKDQVVSTLLALHDAGITMDDEAMEGWALAHGWSGKNPQQLGKYVRDINQGKRPQCRRPDYV------------ : UniRef90_UPI00035E69EE
UniRef90_UPI0004263FB7 : -IVKRAMQQLTSINMSTGISHPKDNDRAKTFIKALHKYEPELNADIIGSYLVREHWETRHAKDIEKLIETLNSGS---------------------- : UniRef90_UPI0004263FB7
UniRef90_UPI00036A4F62 : -VVLEALKGLTVVNHNNTIAAGYEKDHVVSALLALHDAGLPMDADTMQGWALAHGWSGKNPAHLAKYVRDIKTGKR--------------------- : UniRef90_UPI00036A4F62
UniRef90_A0A024H1U6 : -IVIEALRSLTTVNHNNTISAGYEKDRVVGVLLALRDARIPMDADAIQGWALAHGWAGKNPERLAQYVRDINSGKR--------------------- : UniRef90_A0A024H1U6
UniRef90_K4LEZ9 : ---KSALDIITKVNLATGIYHPLDLNKAVDVFDQLYETGDYIHPDEVKNYLIAEGWKERHAHDVS-------------------------------- : UniRef90_K4LEZ9
UniRef90_UPI0002197AEE : SVLEQAIKRLASLTPISGVANPIDKSKAIGLFKALLSHGHALTYHPIYDILVECGWPSDQASDAADLAEAVG------------------------- : UniRef90_UPI0002197AEE
UniRef90_UPI000376277B : --VAAALRRFGAANKSTGATHPADRKRWMHFLILAHQSGGALSADFLTRWVEAEGWDDESAHDLA-------------------------------- : UniRef90_UPI000376277B
UniRef90_UPI000376969B : -----------------GLVDQRERAGVAEALTYFRQRGHTFDPAQLVVEAIRQGWPGSDALEIAELATSVNAGKQL-------------------- : UniRef90_UPI000376969B
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91----- :
OrigSeq : TAIEKALDFIGGMNTSASVPHSMDESTAKGILKYLHDLGVPVSPEVVVARGEQEGWNPEFTKKVAGWAEKVASGNRILIKNPEYFSTYMQEQLKELV : OrigSeq
Jnet : -HHHHHHHHH-------------HHHHHHHHHHHHHH------HHHHHHHHHH-------HHHHHHHHHHHH---EEEEE-----HHHHHHHHHH-- : Jnet
jhmm : -HHHHHHHHH---------------HHHHHHHHHHHH------HHHHHHHHHH-------HHHHHHHHHHHH---EEEEE------HHHHHHHHH-- : jhmm
jpssm : -HHHHHHHH--------------HHHHHHHHHHHHHH------HHHHHHHHHH------HHHHHHHHHHHHH---EEEEE----HHHHHHHHHHH-- : jpssm
Lupas 14 : ------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : -BB--BB--B--BB-BBBB-BB----BB--BB-BB----B-B----B--BB----B---BB--B--BB--B-----BBB-B--BB---B---B--B- : Jnet_25
Jnet_5 : -----BB--B--B--B--B--------B--BB--B-----------B---B------------B--BB--------B-B-------------B---- : Jnet_5
Jnet_0 : -----B-------------------------B--B---------------B------------B--------------------------------- : Jnet_0
Jnet Rel : 1699999752577777777765203999999999875278874689999987527887518999999998745873787447753289999998518 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.