QUERY                  : MQYFSPEQQYNAWIVSDLVKQIFHKRAGCSPGIHELAVFAEEHFHIDIDFVFSIIMNIGDIEFALTDEIEKKLSGYLSTLLPYVTADMFETSKANAHAFLSAAYHLFV : QUERY 
UniRef90_E3E3F6        : IQYFSPEQQYNAWVVSDLVKQVFHQRIGSPAGIHELAVFAEETFHIDIDFVFSIIMNIGDIEFAVSEELEEKLSGYLSALLPFVSADMLAASQANANEFLSNAYHLFL : UniRef90_E3E3F6
UniRef90_E1UNJ9        : IHYFSPEQQFNAWVVSDLVKQVFRRHTRCPDGIKELTVFAENTFHINIDFVFSIIINIGDIESVLPKEIENTLGSYLTALRPVITADMLHSSKTNAYEYLTDIYRLF- : UniRef90_E1UNJ9
UniRef90_UPI00028A2B54 : MQYFSPKQQYNAWVVSDLVKQVFHQRVGYSAGIHQLAIFAEKTFHIDIDFVFSIVMNIGDIEFAISEEIEKKLSGYLSVLLPHVSRDMLEASKANASSFLSAVYDLFV : UniRef90_UPI00028A2B54
UniRef90_M5P807        : MNYFSPEQQYNAWIISDLLKQIFSKEDRQDANTHLFETFAAQQFGINIDFVFSIIMNIGDTEMQTANSTEDILASYLFSLLPFVTKDMINDSKENANQYLADVYHLFL : UniRef90_M5P807
UniRef90_W8QX95        : MYYFSAEQQFNAWVVSDLVKQLFQKWNPEESKAKPLTLFAEQHFHICIDYLFSIIINIGDIE-SIEQDPQDLLSSYLNILFPFVTHDMMKASMQNANEYLADEYQLF- : UniRef90_W8QX95
UniRef90_UPI00047C4589 : MNYFSQEQQYNAWIISDLAKQIFLSEGHQETDTHIFESFAARKFGINIDYVFSIIMNIGDPENRTAHSTEDVLASYLFSLLPFITKEMIKASREDAKQYVAADYHLFL : UniRef90_UPI00047C4589

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101----- :
OrigSeq                : MQYFSPEQQYNAWIVSDLVKQIFHKRAGCSPGIHELAVFAEEHFHIDIDFVFSIIMNIGDIEFALTDEIEKKLSGYLSTLLPYVTADMFETSKANAHAFLSAAYHLFV : OrigSeq

Jnet                   : -----------HHHHHHHHHHHHH---------HHHHHHHHH-------HEEEEEE------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--- : Jnet
jhmm                   : -----------HHHHHHHHHHHHH---------EEEHHHHHH-------EEEEEEE------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---- : jhmm
jpssm                  : -----------HHHHHHHHHHHHHH--------HHHHHHHHH----HHHHHHHHHH----------HHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHHHH-- : jpssm

Lupas 14               : ------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21               : ------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28               : ------------------------------------------------------------------------------------------------------------ : Lupas 28

Jnet_25                : --BB-----BBBBBBB-BB--BB---------B--BBBBB---B-BBBBBBBBBBBBBB-B---B---B--BBBBBBBBBBBBBB--BB--B---B--BB--BB-BB- : Jnet_25
Jnet_5                 : -----------B-BB--BB--B-------------B---B-------B-BBBBBBB-B--------------B---B-BB---B-----------B---B-------- : Jnet_5
Jnet_0                 : -------------BB------------------------B-------------BBB-----------------------B-------------------B-------- : Jnet_0
Jnet Rel               : 998888776207999999999986047888763123887541268643100111111678877510218999999999875665479999997530789999881039 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.