SILENT_MODE
BLOCK_FILE jp_kxK6vnk.concise.blc
MAX_NSEQ 208
MAX_INPUT_LEN 210
OUTPUT_FILE jp_kxK6vnk.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 156 197   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 198 156 207 H SPACE
SUB_CHARS 1 198 156 207 E SPACE
SUB_CHARS 1 198 156 207 - SPACE
STRAND 64 201 65
COLOUR_TEXT_REGION 64 201 65 201 51
STRAND 115 201 118
COLOUR_TEXT_REGION 115 201 118 201 51
HELIX 11 201 24
COLOUR_TEXT_REGION 11 201 24 201 50
HELIX 30 201 40
COLOUR_TEXT_REGION 30 201 40 201 50
HELIX 45 201 53
COLOUR_TEXT_REGION 45 201 53 201 50
HELIX 70 201 77
COLOUR_TEXT_REGION 70 201 77 201 50
HELIX 82 201 96
COLOUR_TEXT_REGION 82 201 96 201 50
HELIX 119 201 130
COLOUR_TEXT_REGION 119 201 130 201 50
HELIX 145 201 152
COLOUR_TEXT_REGION 145 201 152 201 50
STRAND 64 206 66
COLOUR_TEXT_REGION 64 206 66 206 51
STRAND 115 206 118
COLOUR_TEXT_REGION 115 206 118 206 51
HELIX 11 206 24
COLOUR_TEXT_REGION 11 206 24 206 50
HELIX 30 206 39
COLOUR_TEXT_REGION 30 206 39 206 50
HELIX 45 206 52
COLOUR_TEXT_REGION 45 206 52 206 50
HELIX 70 206 77
COLOUR_TEXT_REGION 70 206 77 206 50
HELIX 82 206 95
COLOUR_TEXT_REGION 82 206 95 206 50
HELIX 119 206 130
COLOUR_TEXT_REGION 119 206 130 206 50
HELIX 145 206 152
COLOUR_TEXT_REGION 145 206 152 206 50
STRAND 64 207 65
COLOUR_TEXT_REGION 64 207 65 207 51
STRAND 115 207 118
COLOUR_TEXT_REGION 115 207 118 207 51
HELIX 10 207 24
COLOUR_TEXT_REGION 10 207 24 207 50
HELIX 29 207 40
COLOUR_TEXT_REGION 29 207 40 207 50
HELIX 46 207 53
COLOUR_TEXT_REGION 46 207 53 207 50
HELIX 71 207 78
COLOUR_TEXT_REGION 71 207 78 207 50
HELIX 81 207 96
COLOUR_TEXT_REGION 81 207 96 207 50
HELIX 119 207 130
COLOUR_TEXT_REGION 119 207 130 207 50
HELIX 145 207 152
COLOUR_TEXT_REGION 145 207 152 207 50