SILENT_MODE
BLOCK_FILE jp_zxK8wkO.concise.blc
MAX_NSEQ 90
MAX_INPUT_LEN 92
OUTPUT_FILE jp_zxK8wkO.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 78 79   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 80 78 89 H SPACE
SUB_CHARS 1 80 78 89 E SPACE
SUB_CHARS 1 80 78 89 - SPACE
STRAND 25 83 29
COLOUR_TEXT_REGION 25 83 29 83 51
STRAND 33 83 41
COLOUR_TEXT_REGION 33 83 41 83 51
STRAND 46 83 53
COLOUR_TEXT_REGION 46 83 53 83 51
STRAND 60 83 63
COLOUR_TEXT_REGION 60 83 63 83 51
HELIX 3 83 15
COLOUR_TEXT_REGION 3 83 15 83 50
HELIX 68 83 76
COLOUR_TEXT_REGION 68 83 76 83 50
STRAND 25 88 30
COLOUR_TEXT_REGION 25 88 30 88 51
STRAND 33 88 41
COLOUR_TEXT_REGION 33 88 41 88 51
STRAND 46 88 53
COLOUR_TEXT_REGION 46 88 53 88 51
STRAND 60 88 63
COLOUR_TEXT_REGION 60 88 63 88 51
HELIX 3 88 15
COLOUR_TEXT_REGION 3 88 15 88 50
HELIX 67 88 76
COLOUR_TEXT_REGION 67 88 76 88 50
STRAND 25 89 28
COLOUR_TEXT_REGION 25 89 28 89 51
STRAND 33 89 41
COLOUR_TEXT_REGION 33 89 41 89 51
STRAND 46 89 52
COLOUR_TEXT_REGION 46 89 52 89 51
STRAND 61 89 63
COLOUR_TEXT_REGION 61 89 63 89 51
HELIX 3 89 15
COLOUR_TEXT_REGION 3 89 15 89 50
HELIX 68 89 76
COLOUR_TEXT_REGION 68 89 76 89 50