QUERY : SQLMGIITRLQSLQETAEAANEPMQRYFEVNGEKICSVKYFEKNQTFELTVFQKGEKPNTYPFDNIDMVSIEIFELLQ : QUERY
UniRef90_B7GIC3 : SQLLGIIQRLISLQEQKTGTNEAPQRNFEVNGEKKCSVTYYEKTNTFVLEVYEKGEKPKSYQFDNIDMIAIEIFDLL- : UniRef90_B7GIC3
UniRef90_UPI0001850CD0 : SQLLGIIQRLKSMQESGESGDIPQ-RYFELEGKKLCQVKYFPATDTFELEVYNDDKKPSKYPFDDIDITAIEIFELLQ : UniRef90_UPI0001850CD0
UniRef90_UPI0002891B0D : SQLQGIISRLISLQENA-NGGEPPQRFFEVNGERKCSVKYFNKTSTFELEVYQQGEKPKTYQFDNIDMIAIEIFDLI- : UniRef90_UPI0002891B0D
UniRef90_N0AS80 : SQLQGILTRLKNLQDQA-NGGEPAQRFFEVNGERKCQVTYNPKTATYELEVYNEKEKPKRYQFDNVDMIAIEIFDLIQ : UniRef90_N0AS80
UniRef90_UPI0001E89502 : SLLVGIVKRLNDLKETSEAGNEPAQRFFEVNGEKVCSVKFFDKTNTYELEVFLKGENPKTYQFDNIDMIAIEIFDLIH : UniRef90_UPI0001E89502
UniRef90_UPI000478EC53 : SQLLGIITRLQNLQE-NSGSGEPVQRFFEVEGEKRCSVKYFDKNSTFELEVYQKGEKPQSYQFDNIDMIAMEIFDLLQ : UniRef90_UPI000478EC53
UniRef90_F7Z3J3 : SQLLGIIQRLQAMQEAKD-TGEVQQRRFEVNGKALCQVKFFPQTGTFELEVFDGQKHASKYQFDDLDIAAIEIFDIVQ : UniRef90_F7Z3J3
UniRef90_V6Q4Z7 : SQLVAIIKRLEAMTEATD--NEIQVRRFERDGVEKCLVTYDSTSETFELT---ESGSSQVYQFDDVDLVAIEIYELLQ : UniRef90_V6Q4Z7
UniRef90_F3Y957 : SQLVAIIKRLEAMTEAED--NEIQVRRFEHDGTEKCMVSYDRSTKTFELT---EADTGQSYQFDNIDIVAIEIYDLIQ : UniRef90_F3Y957
UniRef90_K8E5E2 : SQLVAIIHRLEAMQENTDS--EVQVRRFEKEGQERCLISYDPKAETYELEEVSD---HSVYQFDDIDLIAIEIYELLQ : UniRef90_K8E5E2
UniRef90_C5FB75 : SQLVAIIKRLEAMQA---GDGETQSRRFEKNGDEKGLVTYDPKTETYELEEL---GTHQTFQFDNIDLAAMEIYDLM- : UniRef90_C5FB75
UniRef90_UPI00037E662F : SQLVGIVQRLKSLQEGGEQ-GEVQQRLFELNGKMLCQVKYFPNKDTFELEVYDKDGKGSKYPFDDIDMTAIEIFELLQ : UniRef90_UPI00037E662F
UniRef90_X0PWN7 : SQLVAIIKRLEAMQ--ADTSGEVQTRRFETNGVEKGLVSFDPKSSIYTLEELS---THQTFDFDNIDLTAIEIFDLL- : UniRef90_X0PWN7
UniRef90_D5DBQ7 : SQLQGILTRLVNLREQASGS-EAPQRFFEVEGKRICSVKYHAKTETYELEVYQDGEKPAVYQFDNVDMIAIEIFELIH : UniRef90_D5DBQ7
UniRef90_UPI0002F71BC1 : SQLQGIITRLLSLQEQAKET-ETAQRFFEIDGVKKCQVTFFNKTAMFELEVYDEKGKSSKYQFDNIDMITIEIFDLLH : UniRef90_UPI0002F71BC1
UniRef90_A0A024DTW2 : SLLQGILTRLVSLQEQAE-SGEVAQRYFEVNGERKCSVKFFDKSEMYELEVYQQGEKPQVYQFDNIDMVAIEIYDII- : UniRef90_A0A024DTW2
UniRef90_D7V107 : SQLMGIIQRLHAMQE--DETSETQSRRFEKNGNPVCEVSFFRASNSFEVEIYA---TNSKYPFDDIDMTAIEIFETLQ : UniRef90_D7V107
UniRef90_U4THQ2 : SQLVAIINRLDAMI--KEDGQEERTRRFEIDGTEKCAVTYDPTSDSFTLEEFD---AHQSFQFDNIDLVAMEIYDLL- : UniRef90_U4THQ2
UniRef90_K6DK68 : SLLHGILKRLMTLQDD-ENNVEPKQRYFEKNGEKKCSVKYFDHTKMFELEVYSPGEKPKTYQFDNIDMVAIDVFEIM- : UniRef90_K6DK68
UniRef90_UPI00035E0358 : SQLLGIIQRLQTMQ-SMEGQEEVPQRQFEVNGKVICQVKYFSGTGTFEVEEYDKDKNKQTYQFDDIDAAAIEIFDIVQ : UniRef90_UPI00035E0358
UniRef90_UPI000249118C : SQLVAIISRLDAMIKSAD--DEVVSRRFEKEGEERGVVTYDPKANAFELEEIS---TKQKFQFDNIDLAAIEIYDLL- : UniRef90_UPI000249118C
UniRef90_Q1WUY2 : SQLVAIITRLDAM--AKSDSDEVQVRRFEKNGSERGQVAYDPTTNTYTLEEM---QTHQKFEFDDIDLAAIEIFDLL- : UniRef90_Q1WUY2
UniRef90_F4BNX6 : SQLVGIIRRLEAMLEDTES--EVQVRRFEKEGNERCVITYDAKPETFEL---LETSTQQVYQFDDVDLVAMEIFELLQ : UniRef90_F4BNX6
UniRef90_N1ZU35 : SQLVAIIERLDAMMKA--DTNEVQSRRFEREGQERGFVTYDPATQTFELEELA---THQKFDFDDIDLAAMEIYDLL- : UniRef90_N1ZU35
UniRef90_G2SN18 : SQLVAIIKRLDAM--SNNEGNEVSSRRFEKDGEERGFVTFDPATKTYTLEEIASKQK---FEFDDIDLAAMEIYDLL- : UniRef90_G2SN18
UniRef90_UPI00021934AC : SQLVAIISRLEAMQ-QGSADDEVRTRRFEKNGAERGLVSFDPQTETYELEELT---NHQKFEFDDIDLIAMEIYDLL- : UniRef90_UPI00021934AC
UniRef90_UPI0002FF30F0 : SQLKAIISRLESLKNQTE-TLEKPQRFFEINGERICSVTYEAKGDLFELKVFNKGEKPKTYEFDNIDIITIEIFDLLQ : UniRef90_UPI0002FF30F0
UniRef90_M5AE55 : SQLIGIINRLKAMQE--DATDEPQPRRFEKEGVEQALVVFNQATHTYTLTEHN---PETTFEFDNIDLVAIELFDLL- : UniRef90_M5AE55
UniRef90_A0A023CZG6 : SQLIAIISRLDAM--TKSEGQEIQTRRFEKNGKELGVVSFDPTTQTFVLEELPDK---QQFEFDNIDLVAIEVYDLL- : UniRef90_A0A023CZG6
UniRef90_W7CX51 : SQLLGIIQRLQAMQE--DETADTQSRRFEKDGEPLCEVKYFHASNSYEIEIYGDKNK---YQFDDIDMTTLEIFEILQ : UniRef90_W7CX51
UniRef90_J1F086 : SQLAAIISRLDAMV--KEQSDEVQSRRFEKDGRERGVISYDKETDTFTLEELPDK---QQFEFDNIDLAAMEIYDLL- : UniRef90_J1F086
UniRef90_Q38YG2 : SQLVAIIKRLVAMQE--DQSAEVQERRFEKEGDLKATVSYDPQAQAFELE---DSSTHQQFQFDNIDLVAMELYDLL- : UniRef90_Q38YG2
UniRef90_D0BLE7 : SQLVAIVQRLQTM---ADQSTDIEIRRFEKDGVEKCVVTFNQEADSFELE---DCETKQTFQFDDIDLVAIEIFELLQ : UniRef90_D0BLE7
UniRef90_I9L1U1 : SELSAILKRLEAMR--TTDATEVQSRRFEKEGVQRGQVAYDPATSTYTLQEFN---PDQTFEFDNIDLVAIELYDLL- : UniRef90_I9L1U1
UniRef90_A0A011SG18 : SQLIPIIRRLEAMRE--DQSDEVQIRRFEKDGKEQCIVRYDSKSRMFELE---DRTAQQTYEFDNIDYVAVEILELVQ : UniRef90_A0A011SG18
UniRef90_W7B2B8 : SQLKGIIQRLEAMQN--DDAAETQSRRFEKDGKVICEVKYFEPSQSFEIEI---HDSNSKYNFDDIDMTAIEIFEALQ : UniRef90_W7B2B8
UniRef90_K1LB72 : SVLTGIIQRLEAMIKSQHEENEV--RRFEVDGIEKCQVTYHNDNDTFTL---YDSLNKTEYQFDNLDLVAIEIYELL- : UniRef90_K1LB72
UniRef90_W0F9R8 : SDLKQILSRLRAMIDSTDGS--VQTRRFDAFGIEALQVTYDQLTRIWTVQEHREIR---QFQFDDIDLVAIEIYDVLH : UniRef90_W0F9R8
UniRef90_V7HX21 : SQLVAIISRLDTMMKA--EGTDVQMRRFEKEGQERGLVSYNPETEMFTLEDIA---TKQRFEYDNIDLAALDIYDLL- : UniRef90_V7HX21
UniRef90_W7CTG0 : SQLAGIIQRLNAMKE--DESVEVQQRRFEREGKAICEVKYFQATESFEIMILEDDQK---YQFDNIDLAAIDIFELLQ : UniRef90_W7CTG0
UniRef90_UPI0003813E43 : SLLNKILNRLGAMQHDTTSTQ--QERRFEVDGQPRAKVCYNQKTHIFTVEDYSQEET-STLEFDNIDYAAIEIFELVQ : UniRef90_UPI0003813E43
UniRef90_H3NDU9 : SKLVPIVNRLEAMI--QDETGERQVRRFEVNERERCLVTYDNARDMFELE---DRTNGQVYEFDDIDFVAIEILELIQ : UniRef90_H3NDU9
UniRef90_F2I5V2 : SQLKAIISRLEAMLE---EGSDIEVRRFEKEGEERCMVRYDRESESFLL---IEHGVDQTFQFDDIDLAAMEIYDLIQ : UniRef90_F2I5V2
UniRef90_UPI000299DA22 : SKLAAIISRLESMITAGDG----ESRRFEKNGQQVAMVNYDSESKTFKL---NENKNQQVFEFDDVDLVAMEIYDLL- : UniRef90_UPI000299DA22
UniRef90_W1Q4H7 : SVLNGIIQRLEAM---THTESDVEVRRFEIEGVEKCQVAYVKESDTFELT---DHQSGSVFQYDDIDLVAIEIFEML- : UniRef90_W1Q4H7
UniRef90_C8PA73 : STLLQIIRRLNAMR--CDTSGKRQRRVFEQFGVPVCEVTYVRASDEF---IFVRFRPQERFCFDSIDLAAIEIYDSL- : UniRef90_C8PA73
UniRef90_H3NHY1 : SVLTGIIQRLETMTKATE---EPEVRRFELDGVEKCQVAYIPSEDAFEMT---ESSTGTIFRFDNVDLVAIEIFDLL- : UniRef90_H3NHY1
UniRef90_UPI00020D98F9 : SELNQIINRLRAMVDAKDGHN--QTRRFEAFGIEALQVEYNQDAKVWTIHEHRESR---QFQFDDIDLVAIEIYDVLH : UniRef90_UPI00020D98F9
UniRef90_E8JUW3 : SHLVRIINRLEAM--AKDGGN--LKRNFEREGVVVAEVAYSYDEENGPIFTLRDVAARETYTFDSIDLIAMEIYELL- : UniRef90_E8JUW3
UniRef90_J9YIP5 : SDLNQILNRLRAMIDSNDS--QYQSRRFEAFGIEALRVEYDQLTGI--WTIHEHREVRQ-FQFDNIDLVAIEIYDVLH : UniRef90_J9YIP5
UniRef90_UPI0002490235 : SNLFKIISRLHAMQ--VDISNPVQQRRFEKFGIEVCRVEYNHRTKLFTVNEY---RPEYEAEFDDLDLVAIEVYESL- : UniRef90_UPI0002490235
UniRef90_C2EVR0 : SNLEKIIKRLQAM--TLDHSNNRQKRIFEQFGIPLCEVTYIRSSGEF---VFERYRPRERFRFDDIDLAAIEVFNCL- : UniRef90_C2EVR0
UniRef90_K9EYW2 : SDLVSIVKRLNAMREDK--TSVRQVRHFDVDGQERCVVLFDGFTGNFKL-IDPLSEKNNVYEFDDIDHLAVEIFERLQ : UniRef90_K9EYW2
UniRef90_C7XV64 : SNLQKIISRLDAM--SMDQSGDRQVREFQQYGVPVCKVIYDQVNGEF---IVDHYQQESQLVFDNIDLAAIEIYDCL- : UniRef90_C7XV64
UniRef90_UPI00021940B7 : SQLQDILNRLSAMQKSKDGRY--QKRRFDLYGLELLQVTYDQENQ--EWDVLDHRLKKH-YHFDDIDLVAIEIYDLLR : UniRef90_UPI00021940B7
UniRef90_D4YIU7 : SRLEAIITRLKAML---SDDSEIEIRRFEKEGVEKCIVRFNKESESFELEDLTINE---TFQFDDIDLVAMEIYELIQ : UniRef90_D4YIU7
UniRef90_B1MXG3 : SDLNQILGRLRAMIDATD--NQFQSRRFDVFGIEALRVEYDQLTKI--WTVYEHRQIRH-FQFDDIDLVAIEIYDVLH : UniRef90_B1MXG3
UniRef90_Q04G30 : SEITPIINRLEAMVKDQ-SGQEVQVRNFDLYGLNLARVSFDRRTNIFTIKEFRD---NHVFKFDNIDLVAIDIYEILR : UniRef90_Q04G30
UniRef90_UPI0003FA8280 : ------------------------QRFFEVDGVRVCQVTFFNKTETFELEVFNDKSKSSKYQFDNIDMIAIEIFDLL- : UniRef90_UPI0003FA8280
UniRef90_K8Z9R2 : SQLGTIIKCLEKMMDTA--TPEVNTRRFEVEKEERCSVTYIPSSGTFEL---KDTKTNEVYQFDDIDLIAMDIYELLQ : UniRef90_K8Z9R2
UniRef90_G9WI65 : SEILPIISRLEAMV--KDESKRIQVRNFDLYGLNLARVTFDHETRIFTLKEF---RGNQLFEFDNIDLAAIDIYETLR : UniRef90_G9WI65
UniRef90_H3RQ61 : SELQRILRRLDAMAEDTH--GDLQQRTFSAYGIQVCTVTYRQSTGEFTLEQF---QPAAQLTFDSLDLTAIEVYRCL- : UniRef90_H3RQ61
UniRef90_R4RY39 : SNLRRIIKRLEAMV--VDGAGPLQVRTFERYGIAVCDVLFNQESGEF---VVKRIEPGDVMVFDQLDLAAIEVYDCLE : UniRef90_R4RY39
UniRef90_R9WFQ1 : SELLVIIRRLIAMQN--DDSRDRQKRTFEKFGIPLCDVTYIHSREEF---IFVRYRPYERFRFDDIDLVAIEVFNCL- : UniRef90_R9WFQ1
UniRef90_UPI000366553D : SHLVRIINRLELM--ATDGGNF--KRNFERDGVVVAEVAYNNDLDQGATFTLRDVAARETYTFDSIDLIAIEIFDLL- : UniRef90_UPI000366553D
UniRef90_UPI00030353AF : --LESIIRRLRAMQ--FDHRSEEQTRYFEQFGVEVCKVTLNQTTGEWTV---QDARTAPAFCYDNMDMVAVAVYDAL- : UniRef90_UPI00030353AF
UniRef90_UPI0003B3967F : SKLKEIISR----IEKTMVADEPNTRHFAHLGEEVCAVTYQPEENLFKLEDFK---NQQTYQFDDIDLVAIEVYEIL- : UniRef90_UPI0003B3967F
UniRef90_G8P2N1 : SHLLTIMNRLNRLVE---GGDPKETYNFEREGEVMLTVSYSPEDEAFALRYPKQKDASL---FDDIDLVAIEIYDMI- : UniRef90_G8P2N1
UniRef90_F8I126 : SELTTIVQRLQAMQMSTDRA--LQERNFDLYGVNVVTVRYDQPSHLFAL---AEGRNKSQFAFDDLDALAVEIYERL- : UniRef90_F8I126
UniRef90_E4KPC4 : SALSHIIKRLEIMQLSESD----ELRRFEVDDQEKCTVRWQAQTGLFILHDLDRD---AYYYFDNLDLVAIEIYELL- : UniRef90_E4KPC4
UniRef90_H1X6I9 : SDLVQIAQRIRAMM--IDDREDIQTRHFDAFGVTVVTVVYDRPSKVFAVEGLRD--NNRRFAFDDADLVAIDIYEALQ : UniRef90_H1X6I9
UniRef90_C5R7Q9 : -DLSKIVRRVQAMRLDKRST--IQQRDFSVFGVPVVTVLYDSMSGMFALETNERHQ--HRFAFDDVDLLAIDIYEAL- : UniRef90_C5R7Q9
UniRef90_I7L8C1 : SHLSAILNRLEKLVASGDPKD---TFNFEKDEEVQITVSFDGENQVFIVKYPKIKETSD---FDSIDLVAMEIFDLI- : UniRef90_I7L8C1
UniRef90_F9VB62 : SHLMAIMDRLNRLIETADPK---ETYNFEREGEVIATVSFVPEETAFSIKYPKQKDVAI---FDDIDLVAIELYDMI- : UniRef90_F9VB62
UniRef90_G4L2D6 : ------------------------------------IVSYDNATETFELT---EAQTNQAYQFDNIDIVAMEIYDLIQ : UniRef90_G4L2D6
: 1---------11--------21--------31--------41--------51--------61--------71------ :
OrigSeq : SQLMGIITRLQSLQETAEAANEPMQRYFEVNGEKICSVKYFEKNQTFELTVFQKGEKPNTYPFDNIDMVSIEIFELLQ : OrigSeq
Jnet : --HHHHHHHHHHHHH---------EEEEE---EEEEEEEEE----EEEEEEEE------EEEE----HHHHHHHHH-- : Jnet
jhmm : --HHHHHHHHHHHHH---------EEEEEE--EEEEEEEEE----EEEEEEEE------EEEE---HHHHHHHHHH-- : jhmm
jpssm : --HHHHHHHHHHHHH---------EEEE----EEEEEEEEE----EEEEEEE--------EEE----HHHHHHHHH-- : jpssm
Lupas 14 : ------------------------------------------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------ : Lupas 28
Jnet_25 : --B--BB-BB-BB------------B-B-------B-B-BB-----B-B-BB--------B-BBBBBBBBBBBB-BB- : Jnet_25
Jnet_5 : -----BB--B-------------------------B-B----------B-----------B-B----BBBB-B----- : Jnet_5
Jnet_0 : --------------------------------------------------------------------B---B----- : Jnet_0
Jnet Rel : 975899999999862477888773587421755899999716887178888516787753243477206677775159 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.