SILENT_MODE BLOCK_FILE jp_Iqu5t5n.concise.blc MAX_NSEQ 1121 MAX_INPUT_LEN 1123 OUTPUT_FILE jp_Iqu5t5n.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 157 1110 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1111 157 1120 H SPACE SUB_CHARS 1 1111 157 1120 E SPACE SUB_CHARS 1 1111 157 1120 - SPACE STRAND 4 1114 10 COLOUR_TEXT_REGION 4 1114 10 1114 51 STRAND 21 1114 27 COLOUR_TEXT_REGION 21 1114 27 1114 51 STRAND 66 1114 71 COLOUR_TEXT_REGION 66 1114 71 1114 51 STRAND 76 1114 85 COLOUR_TEXT_REGION 76 1114 85 1114 51 STRAND 119 1114 122 COLOUR_TEXT_REGION 119 1114 122 1114 51 STRAND 151 1114 156 COLOUR_TEXT_REGION 151 1114 156 1114 51 HELIX 35 1114 44 COLOUR_TEXT_REGION 35 1114 44 1114 50 HELIX 48 1114 58 COLOUR_TEXT_REGION 48 1114 58 1114 50 HELIX 99 1114 115 COLOUR_TEXT_REGION 99 1114 115 1114 50 HELIX 134 1114 146 COLOUR_TEXT_REGION 134 1114 146 1114 50 STRAND 4 1119 9 COLOUR_TEXT_REGION 4 1119 9 1119 51 STRAND 21 1119 26 COLOUR_TEXT_REGION 21 1119 26 1119 51 STRAND 66 1119 71 COLOUR_TEXT_REGION 66 1119 71 1119 51 STRAND 76 1119 84 COLOUR_TEXT_REGION 76 1119 84 1119 51 STRAND 119 1119 122 COLOUR_TEXT_REGION 119 1119 122 1119 51 STRAND 151 1119 156 COLOUR_TEXT_REGION 151 1119 156 1119 51 HELIX 36 1119 44 COLOUR_TEXT_REGION 36 1119 44 1119 50 HELIX 48 1119 58 COLOUR_TEXT_REGION 48 1119 58 1119 50 HELIX 99 1119 115 COLOUR_TEXT_REGION 99 1119 115 1119 50 HELIX 134 1119 146 COLOUR_TEXT_REGION 134 1119 146 1119 50 STRAND 4 1120 12 COLOUR_TEXT_REGION 4 1120 12 1120 51 STRAND 21 1120 27 COLOUR_TEXT_REGION 21 1120 27 1120 51 STRAND 66 1120 71 COLOUR_TEXT_REGION 66 1120 71 1120 51 STRAND 76 1120 85 COLOUR_TEXT_REGION 76 1120 85 1120 51 STRAND 119 1120 123 COLOUR_TEXT_REGION 119 1120 123 1120 51 STRAND 151 1120 156 COLOUR_TEXT_REGION 151 1120 156 1120 51 HELIX 35 1120 44 COLOUR_TEXT_REGION 35 1120 44 1120 50 HELIX 48 1120 58 COLOUR_TEXT_REGION 48 1120 58 1120 50 HELIX 98 1120 115 COLOUR_TEXT_REGION 98 1120 115 1120 50 HELIX 134 1120 146 COLOUR_TEXT_REGION 134 1120 146 1120 50