SILENT_MODE BLOCK_FILE jp__HjQKb8.concise.blc MAX_NSEQ 392 MAX_INPUT_LEN 394 OUTPUT_FILE jp__HjQKb8.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 285 381 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 382 285 391 H SPACE SUB_CHARS 1 382 285 391 E SPACE SUB_CHARS 1 382 285 391 - SPACE STRAND 168 385 170 COLOUR_TEXT_REGION 168 385 170 385 51 STRAND 176 385 180 COLOUR_TEXT_REGION 176 385 180 385 51 STRAND 184 385 189 COLOUR_TEXT_REGION 184 385 189 385 51 STRAND 195 385 202 COLOUR_TEXT_REGION 195 385 202 385 51 STRAND 213 385 218 COLOUR_TEXT_REGION 213 385 218 385 51 STRAND 228 385 232 COLOUR_TEXT_REGION 228 385 232 385 51 STRAND 239 385 244 COLOUR_TEXT_REGION 239 385 244 385 51 HELIX 8 385 23 COLOUR_TEXT_REGION 8 385 23 385 50 HELIX 28 385 47 COLOUR_TEXT_REGION 28 385 47 385 50 HELIX 56 385 64 COLOUR_TEXT_REGION 56 385 64 385 50 HELIX 79 385 93 COLOUR_TEXT_REGION 79 385 93 385 50 HELIX 98 385 109 COLOUR_TEXT_REGION 98 385 109 385 50 HELIX 112 385 124 COLOUR_TEXT_REGION 112 385 124 385 50 HELIX 131 385 152 COLOUR_TEXT_REGION 131 385 152 385 50 HELIX 254 385 269 COLOUR_TEXT_REGION 254 385 269 385 50 STRAND 168 390 170 COLOUR_TEXT_REGION 168 390 170 390 51 STRAND 176 390 180 COLOUR_TEXT_REGION 176 390 180 390 51 STRAND 184 390 189 COLOUR_TEXT_REGION 184 390 189 390 51 STRAND 195 390 202 COLOUR_TEXT_REGION 195 390 202 390 51 STRAND 213 390 218 COLOUR_TEXT_REGION 213 390 218 390 51 STRAND 228 390 232 COLOUR_TEXT_REGION 228 390 232 390 51 STRAND 239 390 244 COLOUR_TEXT_REGION 239 390 244 390 51 HELIX 8 390 23 COLOUR_TEXT_REGION 8 390 23 390 50 HELIX 27 390 47 COLOUR_TEXT_REGION 27 390 47 390 50 HELIX 56 390 64 COLOUR_TEXT_REGION 56 390 64 390 50 HELIX 79 390 93 COLOUR_TEXT_REGION 79 390 93 390 50 HELIX 98 390 109 COLOUR_TEXT_REGION 98 390 109 390 50 HELIX 112 390 124 COLOUR_TEXT_REGION 112 390 124 390 50 HELIX 131 390 153 COLOUR_TEXT_REGION 131 390 153 390 50 HELIX 255 390 269 COLOUR_TEXT_REGION 255 390 269 390 50 STRAND 169 391 169 COLOUR_TEXT_REGION 169 391 169 391 51 STRAND 175 391 180 COLOUR_TEXT_REGION 175 391 180 391 51 STRAND 184 391 189 COLOUR_TEXT_REGION 184 391 189 391 51 STRAND 195 391 198 COLOUR_TEXT_REGION 195 391 198 391 51 STRAND 201 391 205 COLOUR_TEXT_REGION 201 391 205 391 51 STRAND 212 391 218 COLOUR_TEXT_REGION 212 391 218 391 51 STRAND 228 391 233 COLOUR_TEXT_REGION 228 391 233 391 51 STRAND 238 391 244 COLOUR_TEXT_REGION 238 391 244 391 51 HELIX 8 391 23 COLOUR_TEXT_REGION 8 391 23 391 50 HELIX 28 391 46 COLOUR_TEXT_REGION 28 391 46 391 50 HELIX 56 391 64 COLOUR_TEXT_REGION 56 391 64 391 50 HELIX 79 391 92 COLOUR_TEXT_REGION 79 391 92 391 50 HELIX 98 391 109 COLOUR_TEXT_REGION 98 391 109 391 50 HELIX 112 391 124 COLOUR_TEXT_REGION 112 391 124 391 50 HELIX 131 391 151 COLOUR_TEXT_REGION 131 391 151 391 50 HELIX 253 391 269 COLOUR_TEXT_REGION 253 391 269 391 50