SILENT_MODE
BLOCK_FILE jp_C1wtW_M.concise.blc
MAX_NSEQ 131
MAX_INPUT_LEN 133
OUTPUT_FILE jp_C1wtW_M.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 59 120   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 121 59 130 H SPACE
SUB_CHARS 1 121 59 130 E SPACE
SUB_CHARS 1 121 59 130 - SPACE
STRAND 17 124 23
COLOUR_TEXT_REGION 17 124 23 124 51
STRAND 35 124 37
COLOUR_TEXT_REGION 35 124 37 124 51
STRAND 43 124 50
COLOUR_TEXT_REGION 43 124 50 124 51
STRAND 17 129 22
COLOUR_TEXT_REGION 17 129 22 129 51
STRAND 43 129 50
COLOUR_TEXT_REGION 43 129 50 129 51
HELIX 29 129 31
COLOUR_TEXT_REGION 29 129 31 129 50
STRAND 17 130 24
COLOUR_TEXT_REGION 17 130 24 130 51
STRAND 34 130 38
COLOUR_TEXT_REGION 34 130 38 130 51
STRAND 44 130 50
COLOUR_TEXT_REGION 44 130 50 130 51