QUERY : EACKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL : QUERY
UniRef90_H3BFL8 : EKCKFFHKERMDICESHQHWHTVAKEACYTEGMKLHSYGMLLPCGIDKFHGTEYVCCP- : UniRef90_H3BFL8
UniRef90_W5U9W6 : DKCKFLHQERMDMCESHLHWHTVAKESCSDHTMNLHDYGMLLPCAIDRFRGVEFVCCPV : UniRef90_W5U9W6
UniRef90_F6XMY7 : DKCRFLHREQMDVCESYQHWHETARTACAAEDLDLHSYGMLLPCRLDRFRGVEYVCCP- : UniRef90_F6XMY7
UniRef90_UPI0004572A74 : EKCRFFHKEQMKECKSHQHWQTVAKQACIAESMILHTYGMLLPCGIDRFRGTEYVCCP- : UniRef90_UPI0004572A74
UniRef90_Q6GLQ9 : EKCKFFHKERMDACESHQHWHNVAKEACMTEVMVLHSYGMLLPCAVDQFRGAEYVCCP- : UniRef90_Q6GLQ9
UniRef90_UPI000454122F : EKCRFFHKERLEVCESHQHWHTVATEACLTQGMTLHSYGMLLPCGVDRFHGTENVCCP- : UniRef90_UPI000454122F
UniRef90_UPI0003F0C543 : EKCQFFHKERMEVCENHQHWHSMVRKACLAQGMALYSYGMLLPCGVDQFHGTEYVCCP- : UniRef90_UPI0003F0C543
UniRef90_UPI000441A7B7 : DKCKFLHQEKMDSCETYLYWHSVAKEACSGEHLELHSYGMLLPCGADRFRGVEYVCCP- : UniRef90_UPI000441A7B7
UniRef90_G3VZN8 : ERCQFFHKEKTDVCEYHQHWHAVTKEACMSQGMTLYSYGMLLPCGLDQFHGTEYVCCP- : UniRef90_G3VZN8
UniRef90_B4HAA6 : EGCLFDHIHNASRCWPFVRWNQTGAAACQERGMQMRSFAMLLPCGISLFSGVEFVCCP- : UniRef90_B4HAA6
UniRef90_F6TDQ9 : EGCKFLHQERMDECEGSAYRHQQAQEACRSEGLVLHGSGMLLPCGTDRFRGVEYVCCP- : UniRef90_F6TDQ9
UniRef90_UPI0003F0BDE9 : -KCKFAHIHDSSVCLSHDKWQFEAKESCTTRGMELHDYGMLLPCDIDVFSGVEFVCCPI : UniRef90_UPI0003F0BDE9
UniRef90_T1JN54 : EHCLFDHIHNQSKCQGFDDWNRTAARSCVKREMQLRSFAMLLPCGIDIFSGVEFVCCP- : UniRef90_T1JN54
UniRef90_K7IPS4 : EGCLFDHLHNQTKCWESYRWNSTAADTCRDRNMNLRSFAMLLPCGISLFAGVEFVCCP- : UniRef90_K7IPS4
UniRef90_E9G336 : EQCVFDHVHNASRCWSYDEWNATAATACSARDLKLRSFAILLPCGVDLFSGVEFVCCP- : UniRef90_E9G336
UniRef90_S9X154 : EGCRFLHQERMDQCESSTRRHQEAQEACSSQGLILHGSGMLLPCGTDRFRGVEYVCCP- : UniRef90_S9X154
UniRef90_G3NXV1 : DRCRFLHKEQMDACKSYVYWHNIAKEECAAENLELHSYGMLLPCA-DHFRGVEYVCCP- : UniRef90_G3NXV1
UniRef90_H3DFT9 : EKCKFFHKERMDMCVSHQQWHGVAKEACSKSSMVLHTTAV-ASCGIDKFHGTEYVCCP- : UniRef90_H3DFT9
UniRef90_V5GFP5 : ----FDHIHNQSNCWTFARWNSTAGNACQEKGLQLRSFAMLLPCGISLFSGVEFVCCP- : UniRef90_V5GFP5
UniRef90_UPI00039407E7 : ----------MDVCESHQHWHTVAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCP- : UniRef90_UPI00039407E7
UniRef90_T1FTS7 : EGCIFDHVHDSGMCTNMAEWGVTSAKSCENRSMVQNSFAMLQPCGINKFEGVEFVCCP- : UniRef90_T1FTS7
UniRef90_E2QDB4 : QHCVFDHRHDQRVCQGFSHWNVVADESCRSKDMHLESFGMLLNCKLGMFSGVEYVCCP- : UniRef90_E2QDB4
UniRef90_R7TD28 : EHCLFDHLYQPKSCKSFQKWNATARSICQDRGMEQQSFAILQPCGIDRFNGVEFVCCP- : UniRef90_R7TD28
UniRef90_V8NXP3 : ----------MDSCETYLYWHSVAKEACSGEHLELHSYGMLLPCGADRFRGVEYVCCP- : UniRef90_V8NXP3
UniRef90_C0JV68 : --CKFYHKHDEQMCREPEYWKGVAEEDCRGKKMGINSTGMLLPCGTDKFKGVEYTCCP- : UniRef90_C0JV68
UniRef90_Q06BR2 : EHCIFDHYHDPRVCNEFDQCNETAMSKCSARGMTTQSFAMLWPCEPGHFSGVEFVCCP- : UniRef90_Q06BR2
UniRef90_T1KXD5 : --CLFDHIHNGSICQSSEFWNRTAAASCAERNMKLKSFGMLLPCGVGIFGGVEFVCCP- : UniRef90_T1KXD5
UniRef90_C3XR12 : -KCKFSHIHNSSVCTTFFKWRDAAKEACDKSGFDLHNFAMLKPCGVDLFTGVEFVCCP- : UniRef90_C3XR12
UniRef90_V3ZBV4 : QHCVFDHHHDTDLCMDFDYWNNTANKKCHDRKTLKESFAMLLECELDKFNGVEFVCCP- : UniRef90_V3ZBV4
UniRef90_T2MFP9 : DGCKFDHIHDPELCLTHKEWRRQAQRECSRKSMKLKDYGILLSCKTDYFTGVEFVCCP- : UniRef90_T2MFP9
UniRef90_K7GCV3 : DTCKFLHQEKMDSCESYVYWHGVAKEACSSEGLELHSYGMLLPCGADPLRG-------- : UniRef90_K7GCV3
UniRef90_I7G8J3 : DKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFLRGRVLC--- : UniRef90_I7G8J3
UniRef90_E5SE93 : -NCHFEHVDDENICKDFDYWNQTAIKNCRRNSYSVLSFAMLEPCGLDMFSGVEFVCCP- : UniRef90_E5SE93
UniRef90_A0A016SY78 : --CRFSHVNSGESCSDYQHWRDEATKQCSAKSMTVRSFAVLEPCSLDLFTGVEFVCCP- : UniRef90_A0A016SY78
UniRef90_H3DFU0 : EKCKFFHKERMDMCVSHQQWHGVAKEGTLTSQLLIRTLRHVASCGIDKFHGTEYVCCP- : UniRef90_H3DFU0
UniRef90_F1KQX8 : -GCRFGHVNDRQSCNDYSHWKDEARRQCQSKRMSVRSFAVLEPCGLDLFTGVEFVCCP- : UniRef90_F1KQX8
UniRef90_A7RTM2 : -GCRFQHLHPGSECKSHDFWKIKAEEKCKDQDANLRYYGVLLPCNTGLFTGVEFVCCPV : UniRef90_A7RTM2
UniRef90_J9JYJ5 : ----------SSKCWPFDRWNQTAGQACQDRDHNLRSFAMLLPCGISLFSGVEFVCCP- : UniRef90_J9JYJ5
UniRef90_H3FMK4 : --CRFNHENSQQKCNDYTSWKNEATRLCNSRKMIVRSFAMLEPCGLDLFTGVEYVCCP- : UniRef90_H3FMK4
UniRef90_G3HPS3 : EGCRFLHQERMD-----QFWQEVFPQACSSQGLILHGSGMLLPCGSDRFRGVEYVCCP- : UniRef90_G3HPS3
UniRef90_H2WGW8 : --CQFSHFNSRDQCNDYQHWKEEAGKQCQAKKMMAKSFAVLEPCALDMFGGVEFVCCP- : UniRef90_H2WGW8
UniRef90_T1ERR9 : EPCIFDHLHDSSYCATPKEWLHQSRASCKQKGLVSYSQSMLKPCGLNKFYGVEFVCCP- : UniRef90_T1ERR9
UniRef90_B4PX09 : -----------------AKWNQTGAAACQERGMQMRSFAMLLPCGISVFSGVEFVCCP- : UniRef90_B4PX09
UniRef90_T1EIW3 : -NCIFDHVHEANHCRGFDDWNATAIAACADGHYKLESFSMIQPCGIDRFTGTEFVCCP- : UniRef90_T1EIW3
UniRef90_W4W2T9 : ------------------RWNSTAAETCRERNMNLRSFAMLLPCGISLFSGVEFVCCP- : UniRef90_W4W2T9
UniRef90_Q4RRD5 : EKCKFFHKERMDMCVSHQQWHGVAKEACSKSSMVLHTTA-------------------- : UniRef90_Q4RRD5
UniRef90_Q675U5 : --CAFRHTPNGNNCKDVTSWRTVAQDVCGENDFELHSFAPLATCADDVYQGLQFVCCP- : UniRef90_Q675U5
UniRef90_UPI00045471E4 : ------------------------PQACRAEGFELRDSGMLLPCGPGRFRGVEYVCC-- : UniRef90_UPI00045471E4
UniRef90_F7FBC7 : EKCRFFHKERLEVCESHQHWHTVATESLSAK---------------------------- : UniRef90_F7FBC7
: 1---------11--------21--------31--------41--------51------- :
OrigSeq : EACKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL : OrigSeq
Jnet : ---EE-----------HHHHHHHHHHHHH----EE--------------EEEEEEE--- : Jnet
jhmm : ---EEE----------HHHHHHHHHHHH-----EE-------------EE--EEE---- : jhmm
jpssm : ----------------HHHHHHHHHHHHH----EEE-------------EEEEEEE--- : jpssm
Lupas 14 : ----------------------------------------------------------- : Lupas 14
Lupas 21 : ----------------------------------------------------------- : Lupas 21
Lupas 28 : ----------------------------------------------------------- : Lupas 28
Jnet_25 : --B-B-B------B--B--B---B---B----B-B-BBBBBB-B----B-BBBBBBBB- : Jnet_25
Jnet_5 : --B--------------------B--------------BBB------------B-B--- : Jnet_5
Jnet_0 : -----------------------B----------------------------------- : Jnet_0
Jnet Rel : 98702067777777527899999999870278524146664334677715349980699 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.