SILENT_MODE BLOCK_FILE jp_kZIDjo_.concise.blc MAX_NSEQ 195 MAX_INPUT_LEN 197 OUTPUT_FILE jp_kZIDjo_.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 205 184 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 185 205 194 H SPACE SUB_CHARS 1 185 205 194 E SPACE SUB_CHARS 1 185 205 194 - SPACE STRAND 17 188 29 COLOUR_TEXT_REGION 17 188 29 188 51 STRAND 51 188 56 COLOUR_TEXT_REGION 51 188 56 188 51 STRAND 60 188 67 COLOUR_TEXT_REGION 60 188 67 188 51 STRAND 74 188 84 COLOUR_TEXT_REGION 74 188 84 188 51 STRAND 90 188 99 COLOUR_TEXT_REGION 90 188 99 188 51 STRAND 126 188 135 COLOUR_TEXT_REGION 126 188 135 188 51 STRAND 155 188 160 COLOUR_TEXT_REGION 155 188 160 188 51 STRAND 164 188 169 COLOUR_TEXT_REGION 164 188 169 188 51 STRAND 177 188 179 COLOUR_TEXT_REGION 177 188 179 188 51 STRAND 184 188 199 COLOUR_TEXT_REGION 184 188 199 188 51 HELIX 3 188 13 COLOUR_TEXT_REGION 3 188 13 188 50 HELIX 33 188 46 COLOUR_TEXT_REGION 33 188 46 188 50 HELIX 104 188 121 COLOUR_TEXT_REGION 104 188 121 188 50 HELIX 141 188 151 COLOUR_TEXT_REGION 141 188 151 188 50 STRAND 17 193 28 COLOUR_TEXT_REGION 17 193 28 193 51 STRAND 52 193 56 COLOUR_TEXT_REGION 52 193 56 193 51 STRAND 60 193 67 COLOUR_TEXT_REGION 60 193 67 193 51 STRAND 74 193 84 COLOUR_TEXT_REGION 74 193 84 193 51 STRAND 90 193 99 COLOUR_TEXT_REGION 90 193 99 193 51 STRAND 126 193 135 COLOUR_TEXT_REGION 126 193 135 193 51 STRAND 155 193 160 COLOUR_TEXT_REGION 155 193 160 193 51 STRAND 164 193 169 COLOUR_TEXT_REGION 164 193 169 193 51 STRAND 178 193 179 COLOUR_TEXT_REGION 178 193 179 193 51 STRAND 184 193 199 COLOUR_TEXT_REGION 184 193 199 193 51 HELIX 3 193 13 COLOUR_TEXT_REGION 3 193 13 193 50 HELIX 33 193 46 COLOUR_TEXT_REGION 33 193 46 193 50 HELIX 104 193 121 COLOUR_TEXT_REGION 104 193 121 193 50 HELIX 141 193 151 COLOUR_TEXT_REGION 141 193 151 193 50 STRAND 17 194 29 COLOUR_TEXT_REGION 17 194 29 194 51 STRAND 51 194 56 COLOUR_TEXT_REGION 51 194 56 194 51 STRAND 60 194 68 COLOUR_TEXT_REGION 60 194 68 194 51 STRAND 74 194 85 COLOUR_TEXT_REGION 74 194 85 194 51 STRAND 90 194 99 COLOUR_TEXT_REGION 90 194 99 194 51 STRAND 126 194 135 COLOUR_TEXT_REGION 126 194 135 194 51 STRAND 159 194 160 COLOUR_TEXT_REGION 159 194 160 194 51 STRAND 164 194 169 COLOUR_TEXT_REGION 164 194 169 194 51 STRAND 177 194 179 COLOUR_TEXT_REGION 177 194 179 194 51 STRAND 184 194 191 COLOUR_TEXT_REGION 184 194 191 194 51 STRAND 195 194 200 COLOUR_TEXT_REGION 195 194 200 194 51 HELIX 3 194 13 COLOUR_TEXT_REGION 3 194 13 194 50 HELIX 33 194 46 COLOUR_TEXT_REGION 33 194 46 194 50 HELIX 103 194 120 COLOUR_TEXT_REGION 103 194 120 194 50 HELIX 141 194 152 COLOUR_TEXT_REGION 141 194 152 194 50