SILENT_MODE BLOCK_FILE jp_7EPDhbD.concise.blc MAX_NSEQ 947 MAX_INPUT_LEN 949 OUTPUT_FILE jp_7EPDhbD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 305 936 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 937 305 946 H SPACE SUB_CHARS 1 937 305 946 E SPACE SUB_CHARS 1 937 305 946 - SPACE STRAND 2 940 9 COLOUR_TEXT_REGION 2 940 9 940 51 STRAND 34 940 39 COLOUR_TEXT_REGION 34 940 39 940 51 STRAND 61 940 65 COLOUR_TEXT_REGION 61 940 65 940 51 STRAND 87 940 88 COLOUR_TEXT_REGION 87 940 88 940 51 STRAND 105 940 109 COLOUR_TEXT_REGION 105 940 109 940 51 STRAND 140 940 146 COLOUR_TEXT_REGION 140 940 146 940 51 STRAND 176 940 178 COLOUR_TEXT_REGION 176 940 178 940 51 STRAND 204 940 208 COLOUR_TEXT_REGION 204 940 208 940 51 STRAND 231 940 234 COLOUR_TEXT_REGION 231 940 234 940 51 STRAND 251 940 254 COLOUR_TEXT_REGION 251 940 254 940 51 STRAND 289 940 298 COLOUR_TEXT_REGION 289 940 298 940 51 HELIX 14 940 29 COLOUR_TEXT_REGION 14 940 29 940 50 HELIX 44 940 56 COLOUR_TEXT_REGION 44 940 56 940 50 HELIX 72 940 81 COLOUR_TEXT_REGION 72 940 81 940 50 HELIX 112 940 126 COLOUR_TEXT_REGION 112 940 126 940 50 HELIX 131 940 134 COLOUR_TEXT_REGION 131 940 134 940 50 HELIX 155 940 167 COLOUR_TEXT_REGION 155 940 167 940 50 HELIX 184 940 197 COLOUR_TEXT_REGION 184 940 197 940 50 HELIX 213 940 224 COLOUR_TEXT_REGION 213 940 224 940 50 HELIX 239 940 244 COLOUR_TEXT_REGION 239 940 244 940 50 HELIX 257 940 273 COLOUR_TEXT_REGION 257 940 273 940 50 STRAND 2 945 9 COLOUR_TEXT_REGION 2 945 9 945 51 STRAND 34 945 39 COLOUR_TEXT_REGION 34 945 39 945 51 STRAND 61 945 65 COLOUR_TEXT_REGION 61 945 65 945 51 STRAND 86 945 89 COLOUR_TEXT_REGION 86 945 89 945 51 STRAND 105 945 109 COLOUR_TEXT_REGION 105 945 109 945 51 STRAND 140 945 146 COLOUR_TEXT_REGION 140 945 146 945 51 STRAND 176 945 178 COLOUR_TEXT_REGION 176 945 178 945 51 STRAND 205 945 208 COLOUR_TEXT_REGION 205 945 208 945 51 STRAND 231 945 236 COLOUR_TEXT_REGION 231 945 236 945 51 STRAND 251 945 254 COLOUR_TEXT_REGION 251 945 254 945 51 STRAND 289 945 298 COLOUR_TEXT_REGION 289 945 298 945 51 HELIX 14 945 29 COLOUR_TEXT_REGION 14 945 29 945 50 HELIX 44 945 56 COLOUR_TEXT_REGION 44 945 56 945 50 HELIX 73 945 81 COLOUR_TEXT_REGION 73 945 81 945 50 HELIX 111 945 126 COLOUR_TEXT_REGION 111 945 126 945 50 HELIX 128 945 128 COLOUR_TEXT_REGION 128 945 128 945 50 HELIX 131 945 134 COLOUR_TEXT_REGION 131 945 134 945 50 HELIX 154 945 167 COLOUR_TEXT_REGION 154 945 167 945 50 HELIX 184 945 197 COLOUR_TEXT_REGION 184 945 197 945 50 HELIX 212 945 224 COLOUR_TEXT_REGION 212 945 224 945 50 HELIX 241 945 245 COLOUR_TEXT_REGION 241 945 245 945 50 HELIX 257 945 273 COLOUR_TEXT_REGION 257 945 273 945 50 STRAND 2 946 8 COLOUR_TEXT_REGION 2 946 8 946 51 STRAND 34 946 38 COLOUR_TEXT_REGION 34 946 38 946 51 STRAND 61 946 65 COLOUR_TEXT_REGION 61 946 65 946 51 STRAND 105 946 109 COLOUR_TEXT_REGION 105 946 109 946 51 STRAND 142 946 146 COLOUR_TEXT_REGION 142 946 146 946 51 STRAND 177 946 177 COLOUR_TEXT_REGION 177 946 177 946 51 STRAND 204 946 208 COLOUR_TEXT_REGION 204 946 208 946 51 STRAND 230 946 231 COLOUR_TEXT_REGION 230 946 231 946 51 STRAND 251 946 254 COLOUR_TEXT_REGION 251 946 254 946 51 STRAND 289 946 297 COLOUR_TEXT_REGION 289 946 297 946 51 HELIX 14 946 29 COLOUR_TEXT_REGION 14 946 29 946 50 HELIX 44 946 56 COLOUR_TEXT_REGION 44 946 56 946 50 HELIX 71 946 81 COLOUR_TEXT_REGION 71 946 81 946 50 HELIX 116 946 126 COLOUR_TEXT_REGION 116 946 126 946 50 HELIX 156 946 167 COLOUR_TEXT_REGION 156 946 167 946 50 HELIX 186 946 196 COLOUR_TEXT_REGION 186 946 196 946 50 HELIX 214 946 223 COLOUR_TEXT_REGION 214 946 223 946 50 HELIX 238 946 243 COLOUR_TEXT_REGION 238 946 243 946 50 HELIX 257 946 273 COLOUR_TEXT_REGION 257 946 273 946 50