QUERY : MLTRFLGPRYRQLARNWVPTASLWGAVGAVGLVWATDWRLILDWVPYINGKFK : QUERY
UniRef90_UPI000388DDE0 : MLNKLMGPRYAQLLRNWTPTLTTWGTVGAVGLVWATDWRLILDYVPYINGKFK : UniRef90_UPI000388DDE0
UniRef90_UPI000332F6BA : MPSRFMGPCYRELAKNWMPTASMWGAVGTVGLVRATDWRLILDWVPYINGKFK : UniRef90_UPI000332F6BA
UniRef90_H3BA68 : MLGKVLGPRYYQLLKNWVPTLATWGTVGGVTLVYSTDWRVVLDYVPYINGKFK : UniRef90_H3BA68
UniRef90_UPI0001DB8473 : MLSKIIGNKYASIAKTWVPNLVFWGGAGGVVFVHFTDWRLILDYVPYINGKFK : UniRef90_UPI0001DB8473
UniRef90_UPI0003F16C73 : MLTRFPGPRYRELAKNWMPTVAMRGTVGAVGLVWATDWRLILDWVSYISGKFK : UniRef90_UPI0003F16C73
UniRef90_D6W680 : ---RLIGKKHIEIASQWIGSAVAFGATAGVGITYATDWKLILQYMPYYNGKFK : UniRef90_D6W680
UniRef90_W5PUP7 : MLTRFLGPRYHWLARDWVPPVSTRGAMGTVGLAWATDWRLILDWVPYVNGKFK : UniRef90_W5PUP7
UniRef90_UPI000393F02F : ILNKIIGAKYIGIARTWVPNMVAWGTVGGVALIHFTDWRLVLDYVPYIRGKFK : UniRef90_UPI000393F02F
UniRef90_C3KJB1 : MISKVIGAKYAAIAKSWIPTMAVWGTAGGVALVHFTDWQLFLDYVPYISGKFK : UniRef90_C3KJB1
UniRef90_UPI0004422521 : --SRFLGRRYRELAKNWIPTVGVRGATGAVGLVWATGWQLILDWVPYNNGKFK : UniRef90_UPI0004422521
UniRef90_UPI0001DB954D : LVSKLIGKRYITQAIQYVPSAGFYGATGFTLLCYFTDWKLVLQYVPYYNTKF- : UniRef90_UPI0001DB954D
UniRef90_E2AY77 : -MALRLGRKHVELAGKWIPSAAAYGTAGTLTLLYFTDWKVVLQYVPFYGGKFK : UniRef90_E2AY77
UniRef90_K7IPB8 : -----IGRKHIELAMKWLPSAATYGTGAGLTLLYFTDWKLVLQYMPYYGGKFK : UniRef90_K7IPB8
UniRef90_D6WAA1 : ---RMIGPKHIRVLMAFVPSAICYTFTSLILVTYMSEWKTVLQYFPYYNGKYQ : UniRef90_D6WAA1
UniRef90_F6SB95 : LMTFRASPYLRDFARKRLPTAGTWGAVGAVGLVWATDWRLILDYVPYINGKFK : UniRef90_F6SB95
UniRef90_E7D1Z2 : MLTKLIGKHYIDMAKAWSKTGVTLGATAGLAFLFVTDWKLIAQYIPIYNTKFK : UniRef90_E7D1Z2
UniRef90_UPI00021A6320 : -----IGKRHFEIATKWIPSALTYGGAAGLTLIYFTDWKVVARYIPFYGSKF- : UniRef90_UPI00021A6320
UniRef90_UPI000258E5F8 : ----RLGKKHFEIATKWIPSAMIYGGSAGLATVYFTDWKVIAAYIPFYGGKFQ : UniRef90_UPI000258E5F8
UniRef90_Q4PM86 : -MVSFLGPRVIELARVWSRSACFYGGAGLLGMTYFTEWKDVLQYLPIYNTKYK : UniRef90_Q4PM86
UniRef90_UPI000329EE46 : -----FGKKHAEIATSFVSSGVGFGGAAGLALLYFTDWKVVLQYMPIYNTKF- : UniRef90_UPI000329EE46
UniRef90_UPI0001DB8474 : MLGRLIKPRYLELANSWKAVGLTWFGAGAISLVWLCDWQAVMGYVPYVKDKY- : UniRef90_UPI0001DB8474
UniRef90_H9JEY7 : ----RVGKKHLEIATAFLSSAGGFGGAAFVTLLYFTDWKVFVANIPYYNGKFK : UniRef90_H9JEY7
UniRef90_UPI0002657B5E : -------PQLQELARIWARSAAAYGATGGLLLCYFTNWKAVLQYVPVYNSKYK : UniRef90_UPI0002657B5E
UniRef90_R4WQV6 : -----LGPRQLQILPKWIPSLTLFGISGAALVTYGSEWRAVLQYVPYYNGKFK : UniRef90_R4WQV6
UniRef90_Q17N95 : -----LGPKQAEQATKWISSAMGFGGAAALFGCYLTDWRVIVTYIPFYGGKF- : UniRef90_Q17N95
UniRef90_UPI0004402667 : ----------HTLGRARLPTVGMWGTVGAVGLVWATDWRLIMDWVPYINGKFK : UniRef90_UPI0004402667
UniRef90_UPI00042BB5F7 : ------------------PTLTTWGTVGTVGLVWATDWRLILDYVPYINGKFK : UniRef90_UPI00042BB5F7
UniRef90_W4WMK5 : -MSLRITRKNIELASKWTPSIVTYGTGAWLSLLYFTDWKAVVRYIPFYGSKFQ : UniRef90_W4WMK5
UniRef90_U4TWC9 : ---RTFGPKQFEALSQYKGSVLAYGLATFLGTIYLCEWKAVLQYLPYYNGVY- : UniRef90_U4TWC9
UniRef90_E9GUX0 : -------PTTITALKAMIPSAVGYGSAAAALGLYLTDWKLVLQYLPFYNGKFE : UniRef90_E9GUX0
UniRef90_A0A026WW87 : -----LTKRHFVLASKWMPSAMTYGAAATLAVLYFTDWKYVLRHVPIYGSKFE : UniRef90_A0A026WW87
UniRef90_UPI000441A964 : MAVFRLKPSMIESLRKQKYLYSLWASTLSVGVVWVTDWRLVLDYVPWINGKFK : UniRef90_UPI000441A964
UniRef90_UPI000393E019 : ------------------PTLATWGGVAGIGVIWATDWKLVLQYVPYIGGKYK : UniRef90_UPI000393E019
UniRef90_J9M937 : -------------LKTWGLSGLSFGVTSFVLLCYVTEWRTVLQFCPYYNGKY- : UniRef90_J9M937
UniRef90_V8NW56 : MLALFLKPSLLEHLRKQKGIYALWATSAVIGGVWLTDWKVILGYVPWINGKFK : UniRef90_V8NW56
UniRef90_I1FSI5 : -------------LRSWSPTALALLAGAGVTLVYMTDWQVVLRYVPYVRGKF- : UniRef90_I1FSI5
UniRef90_UPI00045D5814 : MMTRFLGPRYRQLVKNWIPTAYTWGAVGTLGLAWAADWRLILDWVPYVNGRFK : UniRef90_UPI00045D5814
UniRef90_UPI0002B4DB72 : -----MGKRLKLSRKSWVPTLISWGTGASLLGLYLTDWRVITSYIPFYKGKYQ : UniRef90_UPI0002B4DB72
UniRef90_G1Q0W9 : -MSKFLGPCYVQLAKNWIPMLGMWGAMGTMGLVWATDWRLILDWVPYINGKFK : UniRef90_G1Q0W9
UniRef90_UPI00035006F3 : MIAKLLGPRYQQLAKNWAPVLATWGSVGAVGLIWATDWRLFLDYVPYVNGKFK : UniRef90_UPI00035006F3
UniRef90_U3KA63 : MLSQLLGPRYAQLLQTWTPTLVTWGGVAGVGVIWATDWKLVLQYVPYIGGKFK : UniRef90_U3KA63
UniRef90_UPI00034FFD7E : -----LSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFE : UniRef90_UPI00034FFD7E
UniRef90_E3TER9 : MLAKLIGQKYLSIGKAWVPTLAAWGGVGGIAVIHFTDWRLILDYVPYINGKFK : UniRef90_E3TER9
UniRef90_UPI000440EA81 : ILSRLVGPKYTSVAKAWVPTLLGWGAAGAVAVVHFTDWHLILDYVPYINGKFK : UniRef90_UPI000440EA81
UniRef90_B5DGA7 : VLNKLIGAKYIAIARTWVPTMAGWGSVGGVALVYFTDWRLILDWVPYINGKFK : UniRef90_B5DGA7
UniRef90_W5JPP9 : -----LGRKQAEQAAQWATSAGAYGAAAALIGCYLTDWKVIVTYIPFYGGKF- : UniRef90_W5JPP9
UniRef90_B4MMG7 : -----------QLVKAFAPSVAYFGFASLLTLVYYTEWKAITEWIPIYNTKY- : UniRef90_B4MMG7
UniRef90_E2BUN4 : -----------------------YGTGATLTMLYFTDWKLVLQYVPFYGSKFE : UniRef90_E2BUN4
: 1---------11--------21--------31--------41--------51- :
OrigSeq : MLTRFLGPRYRQLARNWVPTASLWGAVGAVGLVWATDWRLILDWVPYINGKFK : OrigSeq
Jnet : --HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HEEEEEEEE----- : Jnet
jhmm : -HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HEEEEEEEE----- : jhmm
jpssm : ---H-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHEEEEEEE------- : jpssm
Lupas 14 : ----------------------------------------------------- : Lupas 14
Lupas 21 : ----------------------------------------------------- : Lupas 21
Lupas 28 : ----------------------------------------------------- : Lupas 28
Jnet_25 : -----B---BB-BB--B--B--BB--B-BB-BBBBB-B-BBB-BBBBB---B- : Jnet_25
Jnet_5 : ---------B---B--------------------------BB--B-------- : Jnet_5
Jnet_0 : ----------------------------------------B------------ : Jnet_0
Jnet Rel : 94102108999999875458888887877765333223004788864166589 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.