SILENT_MODE
BLOCK_FILE jp_B3x9XtN.concise.blc
MAX_NSEQ 846
MAX_INPUT_LEN 848
OUTPUT_FILE jp_B3x9XtN.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 102 835   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 836 102 845 H SPACE
SUB_CHARS 1 836 102 845 E SPACE
SUB_CHARS 1 836 102 845 - SPACE
STRAND 3 839 8
COLOUR_TEXT_REGION 3 839 8 839 51
STRAND 15 839 20
COLOUR_TEXT_REGION 15 839 20 839 51
STRAND 23 839 28
COLOUR_TEXT_REGION 23 839 28 839 51
STRAND 40 839 43
COLOUR_TEXT_REGION 40 839 43 839 51
STRAND 57 839 61
COLOUR_TEXT_REGION 57 839 61 839 51
STRAND 64 839 72
COLOUR_TEXT_REGION 64 839 72 839 51
STRAND 76 839 83
COLOUR_TEXT_REGION 76 839 83 839 51
STRAND 86 839 87
COLOUR_TEXT_REGION 86 839 87 839 51
STRAND 94 839 94
COLOUR_TEXT_REGION 94 839 94 839 51
STRAND 3 844 8
COLOUR_TEXT_REGION 3 844 8 844 51
STRAND 16 844 20
COLOUR_TEXT_REGION 16 844 20 844 51
STRAND 23 844 28
COLOUR_TEXT_REGION 23 844 28 844 51
STRAND 40 844 43
COLOUR_TEXT_REGION 40 844 43 844 51
STRAND 57 844 61
COLOUR_TEXT_REGION 57 844 61 844 51
STRAND 64 844 72
COLOUR_TEXT_REGION 64 844 72 844 51
STRAND 76 844 83
COLOUR_TEXT_REGION 76 844 83 844 51
STRAND 99 844 100
COLOUR_TEXT_REGION 99 844 100 844 51
STRAND 3 845 8
COLOUR_TEXT_REGION 3 845 8 845 51
STRAND 15 845 20
COLOUR_TEXT_REGION 15 845 20 845 51
STRAND 23 845 28
COLOUR_TEXT_REGION 23 845 28 845 51
STRAND 40 845 43
COLOUR_TEXT_REGION 40 845 43 845 51
STRAND 57 845 60
COLOUR_TEXT_REGION 57 845 60 845 51
STRAND 64 845 72
COLOUR_TEXT_REGION 64 845 72 845 51
STRAND 76 845 83
COLOUR_TEXT_REGION 76 845 83 845 51
STRAND 86 845 87
COLOUR_TEXT_REGION 86 845 87 845 51
STRAND 94 845 94
COLOUR_TEXT_REGION 94 845 94 845 51