SILENT_MODE BLOCK_FILE jp_EdrRuCe.concise.blc MAX_NSEQ 457 MAX_INPUT_LEN 459 OUTPUT_FILE jp_EdrRuCe.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 295 446 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 447 295 456 H SPACE SUB_CHARS 1 447 295 456 E SPACE SUB_CHARS 1 447 295 456 - SPACE STRAND 6 450 10 COLOUR_TEXT_REGION 6 450 10 450 51 STRAND 159 450 162 COLOUR_TEXT_REGION 159 450 162 450 51 STRAND 278 450 282 COLOUR_TEXT_REGION 278 450 282 450 51 HELIX 15 450 19 COLOUR_TEXT_REGION 15 450 19 450 50 HELIX 21 450 38 COLOUR_TEXT_REGION 21 450 38 450 50 HELIX 51 450 69 COLOUR_TEXT_REGION 51 450 69 450 50 HELIX 82 450 101 COLOUR_TEXT_REGION 82 450 101 450 50 HELIX 111 450 120 COLOUR_TEXT_REGION 111 450 120 450 50 HELIX 133 450 147 COLOUR_TEXT_REGION 133 450 147 450 50 HELIX 163 450 178 COLOUR_TEXT_REGION 163 450 178 450 50 HELIX 190 450 199 COLOUR_TEXT_REGION 190 450 199 450 50 HELIX 214 450 219 COLOUR_TEXT_REGION 214 450 219 450 50 HELIX 225 450 236 COLOUR_TEXT_REGION 225 450 236 450 50 HELIX 259 450 272 COLOUR_TEXT_REGION 259 450 272 450 50 STRAND 3 455 10 COLOUR_TEXT_REGION 3 455 10 455 51 STRAND 159 455 162 COLOUR_TEXT_REGION 159 455 162 455 51 STRAND 190 455 191 COLOUR_TEXT_REGION 190 455 191 455 51 STRAND 278 455 283 COLOUR_TEXT_REGION 278 455 283 455 51 HELIX 22 455 38 COLOUR_TEXT_REGION 22 455 38 455 50 HELIX 51 455 68 COLOUR_TEXT_REGION 51 455 68 455 50 HELIX 82 455 101 COLOUR_TEXT_REGION 82 455 101 455 50 HELIX 111 455 120 COLOUR_TEXT_REGION 111 455 120 455 50 HELIX 133 455 147 COLOUR_TEXT_REGION 133 455 147 455 50 HELIX 163 455 177 COLOUR_TEXT_REGION 163 455 177 455 50 HELIX 193 455 198 COLOUR_TEXT_REGION 193 455 198 455 50 HELIX 217 455 219 COLOUR_TEXT_REGION 217 455 219 455 50 HELIX 225 455 236 COLOUR_TEXT_REGION 225 455 236 455 50 HELIX 258 455 271 COLOUR_TEXT_REGION 258 455 271 455 50 STRAND 6 456 9 COLOUR_TEXT_REGION 6 456 9 456 51 STRAND 158 456 163 COLOUR_TEXT_REGION 158 456 163 456 51 STRAND 278 456 279 COLOUR_TEXT_REGION 278 456 279 456 51 HELIX 14 456 37 COLOUR_TEXT_REGION 14 456 37 456 50 HELIX 50 456 69 COLOUR_TEXT_REGION 50 456 69 456 50 HELIX 82 456 101 COLOUR_TEXT_REGION 82 456 101 456 50 HELIX 111 456 119 COLOUR_TEXT_REGION 111 456 119 456 50 HELIX 134 456 147 COLOUR_TEXT_REGION 134 456 147 456 50 HELIX 164 456 178 COLOUR_TEXT_REGION 164 456 178 456 50 HELIX 189 456 199 COLOUR_TEXT_REGION 189 456 199 456 50 HELIX 214 456 219 COLOUR_TEXT_REGION 214 456 219 456 50 HELIX 225 456 235 COLOUR_TEXT_REGION 225 456 235 456 50 HELIX 241 456 244 COLOUR_TEXT_REGION 241 456 244 456 50 HELIX 248 456 248 COLOUR_TEXT_REGION 248 456 248 456 50 HELIX 260 456 273 COLOUR_TEXT_REGION 260 456 273 456 50