QUERY : MDEGISKKFAIQLLEDDAERIKMLIRNQKNSLCISQCKAFEEVVDTQMYGFSRQVTYATRLGILTNDEGHRLLSDLERELNQ : QUERY
UniRef90_UPI000369AE26 : -----HREKAYALLKADAEKILRLIQVQMDNLTMPQCPLYEEVLDTQMFGFSREIDFAVRLGLVDEKDGKELIFSLERKLS- : UniRef90_UPI000369AE26
UniRef90_Q5L118 : -DESMSREKAYALLQADAEKIIQLIRVQMDHLTMPQCPVYEEVLDTQMFGLSREIDFAVRLGLVEAKDGKALLDRLERELS- : UniRef90_Q5L118
UniRef90_K9AUA6 : MDNKVMGQSAYELLNKDADRILQLIKVQMDNLTLPQCPLYEEVLDTQMFGLQKEVDFAVELGLVDREEGKALMSRLEKELSK : UniRef90_K9AUA6
UniRef90_R3WPV3 : --EAMSPEFALSLLNQDADRIKMLIRNQKNSLCISQCKAFEEVVDTQMYGFSRQVTFAVRLGMITKEEGHQLMSDLEKELNR : UniRef90_R3WPV3
UniRef90_B7IVI6 : -----HQEKALALLQADAEKILRLIKVQMDHLTMPQCPLYEEVLDTQMFGLSREVDFAVRLGLIAEEQGKAMLGELERELS- : UniRef90_B7IVI6
UniRef90_K0J7P8 : ------ANKAYALLKADADKILKLIQVQMDNLTMPQCPLYEEVLDTHMFGLSREIDFAIRMDLIKEHEGKALLDNLEKQLNK : UniRef90_K0J7P8
UniRef90_W7CG13 : MNEKEMKRQAYDALKTDANRIWKLIKVQMDNLTLPQCPAYEEVLDTQMYGLSREINFAVRVGLIEADKGRDIMMTLERQL-- : UniRef90_W7CG13
UniRef90_UPI00047E47DE : -----HSEKAYALLKADAEKIQRLIEVQLENLTMPQCPLYEEVLDTQMFGLSREIDFAIRLELVDKETGKQLLSDLERKL-- : UniRef90_UPI00047E47DE
UniRef90_W4PYA9 : ------KEKAYALLKSDADKIRQLIEVQLENLTMPQCPLYEEVLDTQMFGLSREIDFAVRLGLVNEENGKQILGELQRKLD- : UniRef90_W4PYA9
UniRef90_L0EDJ8 : -------QKALLLLQEDADKIEKLIKVQMDNLTTRKCPLYEEVLDTQMYGFSREVDFAIRAGLISESTGKQMIQTLERNL-- : UniRef90_L0EDJ8
UniRef90_V6J059 : -----KREKAYELLQADAQKILKLIGVQMENLTMPQCPLYEEVLDTQMFGLSREIDFAVRLGLVRADEGRELLSSLERQVS- : UniRef90_V6J059
UniRef90_K8E3G0 : MNEFVQKQTALDILMADAEKIYNLINSQKQHLCLAQCPAFEEVVDTQMYGFSKEVDYAVKIGVLTDTEGHRVLSDLEKNLN- : UniRef90_K8E3G0
UniRef90_B1HPU6 : -SQTSFQEKALELLIADADKIARLIRVQMDHLTMPQCPLYEEVLDTQMFGLSREIDFAVKLGLIEREKGKEILDSLEKELS- : UniRef90_B1HPU6
UniRef90_D7V149 : -----HRAEAIDILKQDAKRILQLIKVQMDNLTLPQCPAYEEVLDTQMYGLSKEINFAVRLGLVDPEEGKKLLATLEKELS- : UniRef90_D7V149
UniRef90_UPI00042547EB : ---SEQSEKAYALLKEDADKIIKLIEVQMTNLTMPQCPLYEEVLDTQMFGLSREIDFAIRLNLVSETEGRQLLTNLEQQVS- : UniRef90_UPI00042547EB
UniRef90_E0I3Q9 : -------QKAFNLLEEDANKIEKLIEVQMENLTTRQCPLYEEVLDTQMYGFSREVDFAVRAGLVEESVGRDIVSKLERNLAK : UniRef90_E0I3Q9
UniRef90_R9CI26 : -----HKEKANELLKADAEKILKLIKVQMDNLTMPQCPLYEEVLDTQMYGLSKEIDFAIRLGLVEEQVGKKILDELEKELS- : UniRef90_R9CI26
UniRef90_M7NKA4 : MDTNVQPEKALELLQADAEKIAQLIKVQMDHLTMPQCPLYEEVLDTQMFGLSREIEFAAKLGLIEREQGKEILASLERELS- : UniRef90_M7NKA4
UniRef90_B1YJ65 : ---TVHRQRALELLEADSHKIRRLIEVQLANLTMPQCPLYEEVLDTQMFGLSRQIDFAVRLELIDASEGKQLLDSLEQQLS- : UniRef90_B1YJ65
UniRef90_S0JMI2 : ---SISPELALDLLVQEADRIRMLIRNQKNSLCISQCKAFEEVVDTQMYGLSRQVTFAIRLGIVANEVGQQLLSDLEKDLNQ : UniRef90_S0JMI2
UniRef90_UPI00035F4D59 : ------RERAYTLLKEDAEKIFKLIQVQLDHLTMPQCPLYEEVLDTQMFGLSREIDFAVRLGLIDEKEGKEILGSVERSLTE : UniRef90_UPI00035F4D59
UniRef90_C0ZBS0 : -------QKALALLQADADKIYKLIDVQMENLTMPQCPLYEEVLDTQMFGLSREVEYAVRLGLISDDIGREIMGSLERKLAH : UniRef90_C0ZBS0
UniRef90_Q8ER84 : -----HREKAHALLKADADKILRLIEVQIENLTMPQCPVYEDVLDTQMYGLSREIDFAVRLELISEIEGKALLENLEKKLN- : UniRef90_Q8ER84
UniRef90_F5SF70 : ------AQRAEQLLREDAKKIEHLIAVQLDNLTAPKCPLYEEVLDTQMFGLSREIDFAVRAGLITREQGRSIISELEQKLAH : UniRef90_F5SF70
UniRef90_R2PU47 : -----SPEFALEVLVQDGDRIKKLIENQKNSQCISQCKAFEEVVDTQMYGFSRQVAYAVRLGLVPGDTGHQLLADLERELNR : UniRef90_R2PU47
UniRef90_I4X7Y6 : -EEQTYHLKALELLRADAEKIEQLIKVQMDHLTLPSCPLYEEVLDTQMFGLSREIDFAVKLGLIEREAGKNLMDTLEKKLS- : UniRef90_I4X7Y6
UniRef90_UPI0003113E8B : -------QQALALLKADADKILQLIKVQMDNLTMPQCPLYEEVLDTQMFGLSREINFAVRLNLIKEETGKEIMENLERELS- : UniRef90_UPI0003113E8B
UniRef90_F5LF97 : -----MNQKALNLLEEDAYKIEKLIEIQMENLTTRQCPLYEEVLDTQMYGYSREIDFAIRAGLIPANVGKELLNKLERNLAK : UniRef90_F5LF97
UniRef90_C9A7X1 : --EQIDSTKALDLLRDDAERIKKLIRNQENSLCIAQCKAFEEVVDTQMYGLSRQVAFAIRLGIVDNQTGQQLMADLEKDLNQ : UniRef90_C9A7X1
UniRef90_H3SPP2 : ------SDRALTLLEADAHQIEKLIQVQMENLATRYCPLYEEVLDTQMYGFSRQVDFAVRAGLVEESVGKQLVSKLERNL-- : UniRef90_H3SPP2
UniRef90_A0A033V5D6 : --DSEICQRAYDQLYNDSEKILQLIKVQMDNLTMPQCPLYEEVLDTQMFGLQKEVDFAVQIGLVDREKGQTLMASLEKELSK : UniRef90_A0A033V5D6
UniRef90_V5XMJ7 : --DSLSKETALNVLIDEADRIKRLIQNQTNSLCISQCKAFEEVVDTQMYGFSQQVSFAIRVGIIEKKEGQLMLSELERQLNH : UniRef90_V5XMJ7
UniRef90_F9DPP2 : --QDTYKEKAMKQLHIDAEKIAKLIKVQMDNLTMPQCPLYEEVLDTQMYGLSREIDFAVKLGLVEQEKGREILALLEKELN- : UniRef90_F9DPP2
UniRef90_R2P5L2 : --ENISSDFAIKVLQEDADRIKLLIRNQTNSLCISQCKAFEEVVDTQMYGFSRQVFFAEKVGILKRGEGQQMLSELEAELNR : UniRef90_R2P5L2
UniRef90_H8LEI6 : --DSLSKKLAIQVLNDEAERIKRLIRNQNNSLCISQCKAFEEVVDTQMYGFSRQVGFAVRIGVIGKNEGQLMLSELERELNQ : UniRef90_H8LEI6
UniRef90_S1NWD9 : --EMVSTAAALELLQTEADRIRCLISNQKNCLCVAHCKAFEEVVDTQMYGLSRQVAYAIQLGILENAVGQQLLSDLERDLDR : UniRef90_S1NWD9
UniRef90_UPI0003B313E0 : --------KALQLLQEDAEKIAQLISVQLQNLMLPKCPLYEEVLDTQMFGLSREIDFAVRAGLITRDQGQQIIHDLERKL-- : UniRef90_UPI0003B313E0
UniRef90_E5CND6 : -KQMNINSEAYEQLNQDADRILHLIKVQMDNLTMPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVNKEDGKSLMLRLEKELSK : UniRef90_E5CND6
UniRef90_UPI0003659E3B : --------KALNLLQEDAHKIEKLIEIQMENLDTRYCPLYEEVLDTQVYGFSKEVDFAVRAGLVSDPVGKQLISNLERNLS- : UniRef90_UPI0003659E3B
UniRef90_UPI0002FA4B02 : -KEELSKQ-AYEQLEKDAEKIVQLIEVQMDNLTMPQCPVYEEVLDTQMFGLSKEVHFASRLGLIDPVVGHELLERLEQEVSK : UniRef90_UPI0002FA4B02
UniRef90_V6Q3Q1 : MSQLTTEEVALEVLLTEANKIKNLISNQQNHMCIAQCKAFEEVVDTQMYGFSRQVDFAVKIGVISYEEGQQRLLDLERELNR : UniRef90_V6Q3Q1
UniRef90_UPI0004109EB4 : MSEKQMSKNAYDQLDKDADRILQLIEVQMENLTMPQCPVFEEVLDTQMFGLSKEINFAVRLGLVDAQDGRAILDHLEVEVSK : UniRef90_UPI0004109EB4
UniRef90_E6LFQ0 : --ETVTPEMANSLLLNEANRIRLLIKNQKNSQCISQCKAFEEVVDTQMYGLSRQVAFAIQLGIIQPEVGHQILSSLERDLNH : UniRef90_E6LFQ0
UniRef90_UPI0002492B59 : MKQAVSKKDALAILQESADSIRQLIGNQKYALCLTDCPAFDDVADTRIYGFSCQVQFAVSCGLLTNDEGEQMVTTLENDL-- : UniRef90_UPI0002492B59
UniRef90_W8YLQ5 : -------QKAVQLLQDDANKIEKLIEVQMENLATRKCPLYEEVLDTQMYGFSREVDFAVRAGLIDEAAGKAI---------- : UniRef90_W8YLQ5
UniRef90_N1ZKV3 : MENFISKQQALAVLQQDAAEICDLLGKQSNILCRTDCPAFEEVADTRIYGFSCEVKFLIRSGLLTTSEGHQLIKELEEKL-- : UniRef90_N1ZKV3
UniRef90_H5T450 : --EPISKEHAIQLLNEDACKIKQLIQSQKNSLCIFQCKAFEEIIGTQIYGFSRQVTYAERLGLLTIAEGQQLIKHLEKELDQ : UniRef90_H5T450
UniRef90_UPI00029A98CE : MRESVTKSEMLTILATDADQIKSILSKQRNFLCMSKCPAFEEVADTQIYGFSCEVRLAEKCGLISSQEGKQMVTELEQVLS- : UniRef90_UPI00029A98CE
UniRef90_UPI0004221A86 : -----QSEKAYALLKEDAQKILNLIEVQMSNLTMPQCPLYEEVLDTQMFGLSREIDFAIRLNLIKEDEGKGL---------- : UniRef90_UPI0004221A86
UniRef90_C6J290 : ---------------EDADKIEKLIEVQMENLATRYCPLYEEVLDTQMYGFSRQVDYAIRVGLIQETVGKQILSRLERNL-- : UniRef90_C6J290
UniRef90_A0A023CUX9 : MRESVSRKEVLNALAADAKKIQALLDKQQNLLCLSQCPAFEEVADTQLYGFSKEIQLARTCGLITNEEGQELVKGLEHILS- : UniRef90_A0A023CUX9
UniRef90_UPI0002191A2C : MTDDQQAITADMVLQDDADKIEELVNKQRVSLCLSQCPAFEEVVDTQVFGYSKEVMLAVRLNLIPEEQGHNLVRDLEQRLN- : UniRef90_UPI0002191A2C
UniRef90_S4CWE8 : --DSLSKEFALEVLNQDAERIKLLIRNQKNSLCISQCKAFEEVVDTQMYGFSRQVGFAIRLGIIGKHEGQ------------ : UniRef90_S4CWE8
UniRef90_J0L4G4 : MQEFVSRQEMLEILQADSEKIRVLLDKQRNLLCLSQCPAFEEVADTQLFGFSKEVHLAERCGLITMNEAQQMIQDLEHLLS- : UniRef90_J0L4G4
UniRef90_U1X652 : ------KEQTMQLLRAEANKIEHLIEVQRTNLTMPKCPLYEEVLDTQMFGLSRVVDFLIRLDLLNKEEGKEILDGLEKRVS- : UniRef90_U1X652
UniRef90_W4D560 : --------KAINLLQEDADKIQKLIEVQMENLATRYCPLYEEVLDTQMYGFSREVDFAVRAGLVPELTGKQV---------- : UniRef90_W4D560
UniRef90_UPI0003B70238 : --------KTVGVLKKNADNIYQLILRQKEHLCLAQCPAFEEVIDTQLFGLSKQLDFAVQIGKIDEDKSHEILNHLEKALNE : UniRef90_UPI0003B70238
UniRef90_G6CFW0 : -----QKTTAYLTLEADALRIEQLLRAQIDALCMSQCPIIEEVIDTQLFGFSREVDFAKRMQLISAPQGATLMRELEERVNQ : UniRef90_G6CFW0
UniRef90_A0A011SFT2 : --DQLQTALAKDVLNEDARKISSLIENQK-HLCVS-CPAFEEVIDTQMFGFSKKVEFAVAMGMVEEEEGHIMLSTLEKHLS- : UniRef90_A0A011SFT2
UniRef90_G2SPS1 : MSETVSKQKALENLQKDADNIRYLLKKQRSFLCLTECPAFEEVADTRIYGFTCEVHFAVSCGFLT----------------- : UniRef90_G2SPS1
UniRef90_UPI000469F718 : -----QQTVGYLTLKADADKIQKLLTQQFKALCLSQCPIVEEIIDTQMFGFSKEVDFAKRVQLITADEGNDLVSNLEEQVNQ : UniRef90_UPI000469F718
UniRef90_K9EY48 : --DSVKVQYTKDILMEDANRISKLIENQR-HLCVS-CPAFEEVIDTQLFGFSKKIEFAVQMDLLPEEDGHQMMADLEKHLN- : UniRef90_K9EY48
UniRef90_C8NGU8 : ----MTQNPALVQLTENAKQIYQLISKQKTHLCLAKCPAFEEIIDTQLFGLSKQVEFAVAMDLIHANEGHKIMADLEYALN- : UniRef90_C8NGU8
UniRef90_UPI0004688D5B : MVENISKQQALEVLKQDAADICELLGNQSALFCRNDCPAFEEVADTRLYGFSCEVKFLIKCEILTDVEGQNLIKELEEAL-- : UniRef90_UPI0004688D5B
UniRef90_Q38WQ2 : ---------GYMTLKSDAAKIEALLTKQFDALCLSQCPIIEEIIDTQLFGFTKEVDFAKRVRLISDQEGSQLVNELETRINQ : UniRef90_Q38WQ2
UniRef90_X0PDE0 : --ENLKAQTGLAILKADGDKIRQDLLGQFDDLCLMQCPIIEEIIDTQMLVYSNKVDFAKRCGLISNQVAQELVNDLGLEI-- : UniRef90_X0PDE0
UniRef90_UPI000375FC88 : -----HRQKAFELLKVDAEKILKLIRVQMDNLTMPQCPLYEEVLDTQMFGLSREIDFA------------------------ : UniRef90_UPI000375FC88
UniRef90_E5V240 : MENSLIFIKVRKRIEEDVMQIEDMINACLAIKGQKKCPLYQDVIDTQIYGLTKEINLAVEIGCISYKKGRTILASLEEKAS- : UniRef90_E5V240
: 1---------11--------21--------31--------41--------51--------61--------71--------81 :
OrigSeq : MDEGISKKFAIQLLEDDAERIKMLIRNQKNSLCISQCKAFEEVVDTQMYGFSRQVTYATRLGILTNDEGHRLLSDLERELNQ : OrigSeq
Jnet : ------HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH-HHHHHHHHH-----HHHHHHHHHHHHHHH-- : Jnet
jhmm : ------HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHH--EEEE---HHHHHHH-----HHHHHHHHHHHHHHH-- : jhmm
jpssm : -----HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH-- : jpssm
Lupas 14 : ---------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ----------ccccccccccccccccccccc--------------------------------------------------- : Lupas 21
Lupas 28 : ---------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ----B----BB-BB--BB--B--BB--B---BBB--B-BB-BBB-B-BBBBB--B-BBB-B-BB----B--BB--B---B-- : Jnet_25
Jnet_5 : ---------B---B---B--B---B-----------------B----B------B--B--B-------B--BB--B------ : Jnet_5
Jnet_0 : ---------B---B------B----------------------B------------------------B------------- : Jnet_0
Jnet Rel : 9997217999999999999999999999862478876307899921111100175344310787546768999999987289 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.