SILENT_MODE
BLOCK_FILE jp_F8qqjaO.concise.blc
MAX_NSEQ 60
MAX_INPUT_LEN 62
OUTPUT_FILE jp_F8qqjaO.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 138 49   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 50 138 59 H SPACE
SUB_CHARS 1 50 138 59 E SPACE
SUB_CHARS 1 50 138 59 - SPACE
STRAND 11 53 18
COLOUR_TEXT_REGION 11 53 18 53 51
STRAND 48 53 56
COLOUR_TEXT_REGION 48 53 56 53 51
STRAND 62 53 64
COLOUR_TEXT_REGION 62 53 64 53 51
STRAND 70 53 73
COLOUR_TEXT_REGION 70 53 73 53 51
STRAND 91 53 95
COLOUR_TEXT_REGION 91 53 95 53 51
STRAND 109 53 110
COLOUR_TEXT_REGION 109 53 110 53 51
STRAND 118 53 122
COLOUR_TEXT_REGION 118 53 122 53 51
STRAND 131 53 136
COLOUR_TEXT_REGION 131 53 136 53 51
STRAND 12 58 15
COLOUR_TEXT_REGION 12 58 15 58 51
STRAND 48 58 56
COLOUR_TEXT_REGION 48 58 56 58 51
STRAND 62 58 64
COLOUR_TEXT_REGION 62 58 64 58 51
STRAND 71 58 72
COLOUR_TEXT_REGION 71 58 72 58 51
STRAND 91 58 95
COLOUR_TEXT_REGION 91 58 95 58 51
STRAND 108 58 110
COLOUR_TEXT_REGION 108 58 110 58 51
STRAND 119 58 122
COLOUR_TEXT_REGION 119 58 122 58 51
STRAND 131 58 136
COLOUR_TEXT_REGION 131 58 136 58 51
STRAND 11 59 19
COLOUR_TEXT_REGION 11 59 19 59 51
STRAND 49 59 51
COLOUR_TEXT_REGION 49 59 51 59 51
STRAND 55 59 55
COLOUR_TEXT_REGION 55 59 55 59 51
STRAND 63 59 64
COLOUR_TEXT_REGION 63 59 64 59 51
STRAND 70 59 74
COLOUR_TEXT_REGION 70 59 74 59 51
STRAND 91 59 96
COLOUR_TEXT_REGION 91 59 96 59 51
STRAND 118 59 122
COLOUR_TEXT_REGION 118 59 122 59 51
STRAND 131 59 136
COLOUR_TEXT_REGION 131 59 136 59 51