SILENT_MODE BLOCK_FILE jp_7Nw2_W4.concise.blc MAX_NSEQ 83 MAX_INPUT_LEN 85 OUTPUT_FILE jp_7Nw2_W4.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 134 72 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 73 134 82 H SPACE SUB_CHARS 1 73 134 82 E SPACE SUB_CHARS 1 73 134 82 - SPACE STRAND 22 76 25 COLOUR_TEXT_REGION 22 76 25 76 51 STRAND 41 76 46 COLOUR_TEXT_REGION 41 76 46 76 51 STRAND 60 76 75 COLOUR_TEXT_REGION 60 76 75 76 51 STRAND 103 76 106 COLOUR_TEXT_REGION 103 76 106 76 51 STRAND 117 76 128 COLOUR_TEXT_REGION 117 76 128 76 51 HELIX 3 76 17 COLOUR_TEXT_REGION 3 76 17 76 50 HELIX 80 76 91 COLOUR_TEXT_REGION 80 76 91 76 50 HELIX 130 76 131 COLOUR_TEXT_REGION 130 76 131 76 50 STRAND 22 81 25 COLOUR_TEXT_REGION 22 81 25 81 51 STRAND 41 81 46 COLOUR_TEXT_REGION 41 81 46 81 51 STRAND 60 81 75 COLOUR_TEXT_REGION 60 81 75 81 51 STRAND 103 81 106 COLOUR_TEXT_REGION 103 81 106 81 51 STRAND 117 81 128 COLOUR_TEXT_REGION 117 81 128 81 51 HELIX 3 81 17 COLOUR_TEXT_REGION 3 81 17 81 50 HELIX 80 81 91 COLOUR_TEXT_REGION 80 81 91 81 50 STRAND 21 82 25 COLOUR_TEXT_REGION 21 82 25 82 51 STRAND 40 82 45 COLOUR_TEXT_REGION 40 82 45 82 51 STRAND 60 82 63 COLOUR_TEXT_REGION 60 82 63 82 51 STRAND 65 82 74 COLOUR_TEXT_REGION 65 82 74 82 51 STRAND 102 82 107 COLOUR_TEXT_REGION 102 82 107 82 51 STRAND 109 82 111 COLOUR_TEXT_REGION 109 82 111 82 51 STRAND 117 82 126 COLOUR_TEXT_REGION 117 82 126 82 51 HELIX 3 82 17 COLOUR_TEXT_REGION 3 82 17 82 50 HELIX 80 82 91 COLOUR_TEXT_REGION 80 82 91 82 50 HELIX 130 82 132 COLOUR_TEXT_REGION 130 82 132 82 50