SILENT_MODE BLOCK_FILE jp_NL61rqg.concise.blc MAX_NSEQ 470 MAX_INPUT_LEN 472 OUTPUT_FILE jp_NL61rqg.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 149 459 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 460 149 469 H SPACE SUB_CHARS 1 460 149 469 E SPACE SUB_CHARS 1 460 149 469 - SPACE STRAND 43 463 49 COLOUR_TEXT_REGION 43 463 49 463 51 STRAND 70 463 75 COLOUR_TEXT_REGION 70 463 75 463 51 STRAND 79 463 85 COLOUR_TEXT_REGION 79 463 85 463 51 STRAND 91 463 96 COLOUR_TEXT_REGION 91 463 96 463 51 STRAND 138 463 142 COLOUR_TEXT_REGION 138 463 142 463 51 HELIX 3 463 12 COLOUR_TEXT_REGION 3 463 12 463 50 HELIX 19 463 33 COLOUR_TEXT_REGION 19 463 33 463 50 HELIX 55 463 62 COLOUR_TEXT_REGION 55 463 62 463 50 HELIX 99 463 106 COLOUR_TEXT_REGION 99 463 106 463 50 HELIX 115 463 129 COLOUR_TEXT_REGION 115 463 129 463 50 STRAND 43 468 49 COLOUR_TEXT_REGION 43 468 49 468 51 STRAND 71 468 74 COLOUR_TEXT_REGION 71 468 74 468 51 STRAND 80 468 85 COLOUR_TEXT_REGION 80 468 85 468 51 STRAND 91 468 96 COLOUR_TEXT_REGION 91 468 96 468 51 STRAND 137 468 141 COLOUR_TEXT_REGION 137 468 141 468 51 HELIX 3 468 12 COLOUR_TEXT_REGION 3 468 12 468 50 HELIX 19 468 33 COLOUR_TEXT_REGION 19 468 33 468 50 HELIX 55 468 61 COLOUR_TEXT_REGION 55 468 61 468 50 HELIX 99 468 107 COLOUR_TEXT_REGION 99 468 107 468 50 HELIX 115 468 129 COLOUR_TEXT_REGION 115 468 129 468 50 STRAND 43 469 49 COLOUR_TEXT_REGION 43 469 49 469 51 STRAND 70 469 75 COLOUR_TEXT_REGION 70 469 75 469 51 STRAND 79 469 85 COLOUR_TEXT_REGION 79 469 85 469 51 STRAND 90 469 96 COLOUR_TEXT_REGION 90 469 96 469 51 STRAND 139 469 142 COLOUR_TEXT_REGION 139 469 142 469 51 STRAND 145 469 146 COLOUR_TEXT_REGION 145 469 146 469 51 HELIX 3 469 12 COLOUR_TEXT_REGION 3 469 12 469 50 HELIX 18 469 33 COLOUR_TEXT_REGION 18 469 33 469 50 HELIX 55 469 62 COLOUR_TEXT_REGION 55 469 62 469 50 HELIX 103 469 106 COLOUR_TEXT_REGION 103 469 106 469 50 HELIX 115 469 129 COLOUR_TEXT_REGION 115 469 129 469 50