SILENT_MODE
BLOCK_FILE jp_WL7Fsfh.concise.blc
MAX_NSEQ 88
MAX_INPUT_LEN 90
OUTPUT_FILE jp_WL7Fsfh.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 157 77   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 78 157 87 H SPACE
SUB_CHARS 1 78 157 87 E SPACE
SUB_CHARS 1 78 157 87 - SPACE
HELIX 4 81 9
COLOUR_TEXT_REGION 4 81 9 81 50
HELIX 13 81 17
COLOUR_TEXT_REGION 13 81 17 81 50
HELIX 23 81 31
COLOUR_TEXT_REGION 23 81 31 81 50
HELIX 36 81 49
COLOUR_TEXT_REGION 36 81 49 81 50
HELIX 56 81 72
COLOUR_TEXT_REGION 56 81 72 81 50
HELIX 80 81 89
COLOUR_TEXT_REGION 80 81 89 81 50
HELIX 106 81 116
COLOUR_TEXT_REGION 106 81 116 81 50
HELIX 123 81 134
COLOUR_TEXT_REGION 123 81 134 81 50
HELIX 142 81 155
COLOUR_TEXT_REGION 142 81 155 81 50
HELIX 4 86 9
COLOUR_TEXT_REGION 4 86 9 86 50
HELIX 13 86 17
COLOUR_TEXT_REGION 13 86 17 86 50
HELIX 23 86 31
COLOUR_TEXT_REGION 23 86 31 86 50
HELIX 36 86 50
COLOUR_TEXT_REGION 36 86 50 86 50
HELIX 56 86 72
COLOUR_TEXT_REGION 56 86 72 86 50
HELIX 80 86 89
COLOUR_TEXT_REGION 80 86 89 86 50
HELIX 107 86 116
COLOUR_TEXT_REGION 107 86 116 86 50
HELIX 123 86 134
COLOUR_TEXT_REGION 123 86 134 86 50
HELIX 143 86 155
COLOUR_TEXT_REGION 143 86 155 86 50
HELIX 4 87 9
COLOUR_TEXT_REGION 4 87 9 87 50
HELIX 13 87 18
COLOUR_TEXT_REGION 13 87 18 87 50
HELIX 22 87 31
COLOUR_TEXT_REGION 22 87 31 87 50
HELIX 36 87 49
COLOUR_TEXT_REGION 36 87 49 87 50
HELIX 56 87 72
COLOUR_TEXT_REGION 56 87 72 87 50
HELIX 80 87 89
COLOUR_TEXT_REGION 80 87 89 87 50
HELIX 106 87 116
COLOUR_TEXT_REGION 106 87 116 87 50
HELIX 123 87 133
COLOUR_TEXT_REGION 123 87 133 87 50
HELIX 142 87 155
COLOUR_TEXT_REGION 142 87 155 87 50