QUERY : ARGTIFTQSRLLSSFTPRSEMEKDFMDLDDDVFIAKYSLQDYAFEHVVYGSFNQKIIGGLHLLIGLARRQQKSNLVIQEFVTYDSSIHSYLITDENSGSSKSVCTVIDLLLDDFVDIVKSLNLKCVSKVVNVNVDFKDFQFMLWCNEEKVMTF : QUERY
UniRef90_P0C6W0 : ----YFTQGRVISDFQPRSNMEEDFLNMDMGLFISKYGLEDYGFEHVVFGDVSKTTLGGLHLLISQIRLSKIGVLKVEDFVSSDSTLKSCTVTYVDNPSSKMVCTYVDLLLDDFVNILKSVDLSVVSKVHEVVIDCKVWRWMLWCKDHKVQTF : UniRef90_P0C6W0
UniRef90_F1DAX5 : ----YYTQGRTVESFIPRSEMEKDFLNTDMSVFISKYGLEDYNFEHVVFGDVSKTTVGGLHLLTSQVRLHKLGVLSVADFVSSDSTLKCCTVTYANDPSSKMVCTYMDLLLDDFVLILKNLDLSVVSKVQEIVVDCKMWRWMLWCKDAKVQTF : UniRef90_F1DAX5
UniRef90_F6LQK8 : ----FYSQGRTTADFTPRSVMEKDFLEMDTGLFINKYGLEDYNFEHVVYGDVSKTTLGGLHLLISQIRLSKMGVFKTEEFVSSDNTLKCCTVTYADNPSCKQVCTYMDLLLDDFVTILKSLDLSVVSKVHEVIVDCKPFRWMLWCEGSKVATF : UniRef90_F6LQK8
UniRef90_B1PHK0 : ---SIFTQGRSAENFVPRTQMETDFLELDMGLFISKYGLENFAFEHIVYGDVSKTTLGGLHLLISQVRLSKMGILKVEEFVTGDSSLRCASVTYVDNPSSKMVCSYMDILLDDFVTLLKTLDLSVVSKVHEVIVDCKVYRWMLWCKDHKVQTF : UniRef90_B1PHK0
UniRef90_A8JNZ0 : ----YYSQGRNASTFLPRSQMEKDFLELDTGLFISKYGLEDFNFEHIVYGDVSKTTLGGLHLLISQVRLARIGVLKVEDFVSADDTLHSCSVTYANDPSSKSVCTYMDILLDDFVVILRNLDLSVTSKVHDVIVDCKAWRWMLWCKDSKVATF : UniRef90_A8JNZ0
UniRef90_P0C6X5 : ----FYTQGRNLSDFTPRSDMEYDFLNMDMGVFINKYGLEDFNFEHVVYGDVSKTTLGGLHLLISQFRLSKMGVLKADDFVTSDTTLRCCTVTYLNELSSKVVCTYMDLLLDDFVTILKSLDLGVISKVHEVIIDNKPYRWMLWCKDNHLSTF : UniRef90_P0C6X5
UniRef90_F1DAY2 : ---SYFTQGRTSSNFKARSAMERDFLTMDVDVFINRYGLEELGFKHVVYGDVSKWTLGGLHLLISQVRLANMGVFTIEEFMSTDSTLKSCTVTYVDDPSSKNVCTYMDLLLDDFVTLLRSLDRSVVSKVHEVMVDCKVYRWMLWCKDHKISTF : UniRef90_F1DAY2
UniRef90_F1BYL8 : -TGSYFTQSRKQSSFEPRSTMERDFLELDMDSFVSRYNLQGFAFNHIVYGDFSHTQIGGLHLLIGLVKRCKESSVALEEFLVEDSTIHNYFITDAETGASKAVCSVVDLLLDDFVEIIKSQDLSVVSKVVKVCIDFKDFEFMLWCKDGAVQTF : UniRef90_F1BYL8
UniRef90_F1DAZ0 : -TDTFYTQSRTVDNFTPVTQMETDFLSMSPQDFIAKYDLSNLGMEHIVYGQFNG-IIGGLHLLIGLVRRNIESKLTVESVLGSD-TVTSYAVVDQNTASSKQVCSVLDIVLDDFITILRAQDTSVVSKVVNYCIDFKVFRFMLWCKGGSISTF : UniRef90_F1DAZ0
UniRef90_P0C6W5 : -TDGYFTQSRTVDDFQPRTQLEIDFLDLEQSCFLDKYDLHDLGLEHIVYGQFDGT-IGGLHLLIGAVRRKRTAHLVMETVLGTD-TVTSYAVIDQPTASSKQVCSVVDIILDDFIALIKAQDRSVVSKVVQCCLDFKVFRFMLWCKGGKISTF : UniRef90_P0C6W5
UniRef90_E0XIZ2 : ---TYFTQSRSLDDFKPRSQMEVDFLQLAMDEFIERYKLEGYAFEHIVYGDFSHGQLGGLHLMIGLAKRSLESLLKLEDFIPIDSTVKNYFVTDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVTVTIDYAEISFMLWCKDGHVETF : UniRef90_E0XIZ2
UniRef90_H9BQZ9 : --STICTQGRNVEQFIPKTPMERDFLEMSQESFIDHYQLQDLGVEHIIYGDDSSPVIGGTHTLISLVRNKFEHQLVNHVY----NPVQNCVVTSSN-ASSKNVCTVLDVLLDDYIDIIRQAHYTSKSKVFTVSVDNQQIRFMLWH-DEQVKT- : UniRef90_H9BQZ9
UniRef90_Q80GN7 : ARGTIFTQSRLLSSFTPRSEMEKDFMDLDDDVFIAKYSLQDYAFEHVVYGSFNQKIIGGLHLLIGLARRQQKSNLVIQEFVTYDSSIHSYFITDENSGSSKSVCTVIDLLLDDFVDIVKSLNLKCVSKVVN---------------------- : UniRef90_Q80GN7
UniRef90_P0C6W4 : -TDTYYTLGRTVSDFTPVSEMEKDFLALDSDVFIKKYKLEAYAFEHVVYGDFSRTTLGGLHLLIGLYKKHQEGHIIMEEMLKERATVHNYFVTESNTASFKAVCSVIDLKLDDFVDIIKAMDLSVVSKVVKIPIDLTMIEFMLWCKDGQVQTF : UniRef90_P0C6W4
UniRef90_U5KNN1 : ---SIYTQGRSCSDFEPCTQMEKDFLSMESNVFIKKYNLEDYAFEHVVYGDFSHTTLGGLHLLIGLYKKSLEGHIIMEEMLKESATIHNYFITETNTASFKAVCSVIDLTLDDFVQILKSLDLGVVSKVVKISIDLTFVEFMLWCREGQVKTF : UniRef90_U5KNN1
UniRef90_H9BQZ1 : ---TICTQGRSVEKFTPKTPMEDDFLNLTAQDFITKYQLQGLGVEHIIYGQDDSPVIGGTHALISLVKNKFDFELVNHIY----NPVQNCVVTSPK-ASTKLVCTLLDLILDDYIDIIKQAHFDTKSKVFNVNIDYQNVRFMLWHDDE-VKT- : UniRef90_H9BQZ1
UniRef90_D9J1Z2 : ----FYSQGRTFDTFKARSKMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTLGGMHLLISQVRLSKMGLFSVQEFTNSDSTLKSCCITYADDPSSKSLCTYMDILLDDFVTIVKGLDLSVVSKVVDVVVDCKVWRWMLWCENATIKTF : UniRef90_D9J1Z2
UniRef90_B2BW31 : -TSQLFTEQRSFEDFLPLSVMERDFLNMEAPQFIAKYDCKGLGLEHVLYGDFSKKVIGGAHLTIGLARLYIQEKFDVHEISPSSFDVFKSYFVVTHAGAMKQVCTVLDVLLDDFISILKEIHKGVVSEVLHYIVDYQTVDFMLWMGDNAINTF : UniRef90_B2BW31
UniRef90_H9BR34 : ---TICTQGRLLDKFTPRSKMESDFLTMDQSTFIDTYKLQDLGIDHIIYGDDTKPIIGGTHTFISLVRNKFNCQMVSHIY----NPVQNCVVTST-SASTKEVCTVLDILLDDYVDIIRNAHYTTKSKVFSVTIDNQKVSFMLWH-DANVQT- : UniRef90_H9BR34
UniRef90_I1U343 : ---TLNTQGRNYEVFEPRSDVERDFLDMSEEDFIEKYG-KNLGLQHILYGEVEKPQLGGLHTVIGMYRLLRANKLDAKSVTNSDSDVQNYFVLADN-GSYKQVCTVVDLLLDDFSELLRNILKEYKSKVVTVSIDYHSVNFMAWFEEGSIKT- : UniRef90_I1U343
UniRef90_H9BR16 : -TDTLYSQQRSVVNFKPLTKMEADFLSMTQDQFIQTYDLTNLGVEHILYGDTSKTILGGCHALISLVHSEFSSDFVTHLF----NPVQNMIVTADN-GSSKNVCSVVDLTIDNYIDIIRQAHYETKSKVFTVVIDNMPIKFTIWHDSQKVDTL : UniRef90_H9BR16
UniRef90_H9BR24 : ----YYTQGRTLKDFVPRTTMEVDFMSLTPQEFVHKYDLHNLGIDHILYGDVTTRVIGGCHALISLYYRK----LNVDSVVAHAQPVQNAIII-ASDGKSKEVCTFVDLTIDDYIDIIKRAHYQTQSKVFYVNIDGHNTRFVIWHDD------ : UniRef90_H9BR24
UniRef90_T2BA34 : ---------------------------------------EHYAFEHVVYGDFSHTTLGGLHLLIGLYKKQQEGHIIMEEMLKGSSTIHNYFITETNTAAFKAVCSVIDLKLDDFVMILKSQDLGVVSKVVKVPIDLTMIEFMLWCKDGQVQTF : UniRef90_T2BA34
UniRef90_X2D5D2 : ---TLFSTGRFEANL-------REYLDDDERQFANKH-------QHAFVGDTKGTTVGGCHHITSRYLPKE---------VPADAVVK--VGVSKPGVAAKACCTITDIYLPALEPY---SSPPTTSKVYKINVDNKPCRLMVWAN------- : UniRef90_X2D5D2
UniRef90_Q68772 : ---SVYSTGRFEMDI-------RDYLDSAERDFAAKH-------PHAFIGDTKGTTVGGCHHITSQYLPH---------VLPADSVVK--VGVSKPGVAHKALCTVTDIYLP---MLGLYTSPPTQSKVYKVNVDHKACKLMVW--------- : UniRef90_Q68772
UniRef90_L0CS26 : ---SLFSTGRFELDV-------RHYLDEAEREFALTH-------PHAFIGDTKGTTVGGCHHITSRYLPRE---------LPRDAVVK--VGVSAPGKAFKSCCTVTDVYLPDYTT------PSTQSKVYKVNIDNKMCRLMVW-KDA----- : UniRef90_L0CS26
UniRef90_Q9WNG6 : -------------------------------------------LPHAFIGDVKGTTVGGCHHVTSRYLPRFLPKESVA-VVGVSSPGK----------AAKALCTLTDVYLPDLEAYL---HPETQSKCWRMMLDFKEVRLMVW--------- : UniRef90_Q9WNG6
UniRef90_U5IJ65 : ---TLFSTGRLYN------------LEHDPSL---NFNVHQLPVEHVFAGDFTGTDIGGVHHVVAL------NGYKGTIIPNYVKPIGTGLI---NVGKAVKRTTLVDVCANQLYEKVKQQLVDVVSKVIFVNIDFQEVQFMVFAKDDDIQTF : UniRef90_U5IJ65
UniRef90_A7UKW3 : ---TLVSTGRIATDC-------REYLDTAEEEAAKE-------LPHAFIGDVKGTTVGGCHHITSKYLPRSLPKDSVA-VVGVSSPGK----------AAKAVCTLTDVYLPELRPYLQ---PETASKCWKLKLDFRDVRLMVW--------- : UniRef90_A7UKW3
UniRef90_F5BD13 : ---SIYSTGRFEAGL-------RDYLDLKERQFAEEHA-------HAFIGDVKGTVVGGCHHITSRFLPP-------EIAPGAV----TRVGVSSVGKAAKSLCTVTDVYLP----YLQPYTAPVTSKVYLVNVDQRACRLMVW--------- : UniRef90_F5BD13
UniRef90_P19811 : ---SLFSSGRFETN-------SRAFLDEAEEKFAAAH-------PHACLGEINKSTVGGSHFIFSQYLPP---------LLPADAV--ALVGASLAGKAAKAACSVVDVYAPSFEPYL---HPETLSRVYKIMIDFKPCRLMVW--------- : UniRef90_P19811
UniRef90_Q06502 : ----------------------REYLDEKEMEFSSR-------CPHAFIGEVKGSNVGGCHHVTSRYLPP---------VLVPGSVVK--IGVSCPGKAAKELCTVTDVYLPELDPYL---NPPTKSMDYKLLVDFQPVKLMVW-KDA----- : UniRef90_Q06502
UniRef90_G9FGR6 : ---SIFSSGRLLLNDRTAYPGEQEAMDT---------------WPHVFKGDIKGHTIGGCHHVTS-PNLPQDLAPAMFRAVGSSLPGK----------AAKACTSVFDCYAPYLVDIANT--VTGKSQVVKVTYDLAEKRLMVW--------- : UniRef90_G9FGR6
UniRef90_I6LMN0 : ---------------------------------------------HVTTGDTTSWTIGGMHTLQS-----FENLTNYQIVSAPQNPI--IAINVSKDRGCKVETTALDITLQDYYTISTQQQV-TISRTMVFKLDGGIYRMMVFVDDGSIQT- : UniRef90_I6LMN0
UniRef90_Q008X6 : ---------------------------------------------HVSVGDTSSWTIGGMHVLTA-----FQNITNYQLVSGPANPI--MRINVALERGNKVETTALDTTLQDYY-KIATTNKVTVSKTTFFTLDGGQYRMMNFANDGTIQT- : UniRef90_Q008X6
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151 :
OrigSeq : ARGTIFTQSRLLSSFTPRSEMEKDFMDLDDDVFIAKYSLQDYAFEHVVYGSFNQKIIGGLHLLIGLARRQQKSNLVIQEFVTYDSSIHSYLITDENSGSSKSVCTVIDLLLDDFVDIVKSLNLKCVSKVVNVNVDFKDFQFMLWCNEEKVMTF : OrigSeq
Jnet : ----EE----EE-------HHHHHHH---HHHHHHH---------EEEEEE----EE-HHHHHHHHHH--------EEEE-------EEEEEEE------EEEEEEEHHH--HHHHHHHH-----EEEEEEEEE---EEEEEEEE-------- : Jnet
jhmm : ----EE---EEEE------HHHHHHH---HHHHHHH---------EEEEEEE---EE-HHHHHH------------EEEE--------EEEEEE------EEEEEEEEE---HHHHHHHH----EEEEEEEEEEE--EEEEEEEE-------- : jhmm
jpssm : ----E--------------HHHHHH----HHHHHHH--------EEEEEEE----EEEHHHHHHHHHHH-------EEEE-------EEEEEEE------HHHHHHHHHHHHHHHHHHHH-----EEEEEEEEE---EEEEEEEE-------- : jpssm
Lupas 14 : --------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : --------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ---BBBBBBB-B--B-B-B-B---BB------BB--B-B--B-B-BBBBB-B----BBBBBBBBBBB-------B-B--BB--BB-BBBBBBBB----BB-BBBBBBBBBB--BB-BB--B---BBBBBB-BBB-B--B-BBBBB----B--- : Jnet_25
Jnet_5 : --------------------------------B-----B------BBB-B------BBBBBBBBB---------------------B--BBB-----------BBBBBBBB--B---B----------BB-BBB----B-BBBBB-------- : Jnet_5
Jnet_0 : -----------------------------------------------B----------B------------------------------B-B-----------B--B---B--B----------------------------B---------- : Jnet_0
Jnet Rel : 998501456111077776413666416752888875157888752689985188545005889932311047876132542678873188998447886333322201212179999885178800789999861864899998637863337 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.