SILENT_MODE BLOCK_FILE jp_mewT9iI.concise.blc MAX_NSEQ 912 MAX_INPUT_LEN 914 OUTPUT_FILE jp_mewT9iI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 101 901 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 902 101 911 H SPACE SUB_CHARS 1 902 101 911 E SPACE SUB_CHARS 1 902 101 911 - SPACE STRAND 5 905 11 COLOUR_TEXT_REGION 5 905 11 905 51 STRAND 16 905 24 COLOUR_TEXT_REGION 16 905 24 905 51 STRAND 37 905 46 COLOUR_TEXT_REGION 37 905 46 905 51 STRAND 52 905 57 COLOUR_TEXT_REGION 52 905 57 905 51 STRAND 65 905 70 COLOUR_TEXT_REGION 65 905 70 905 51 STRAND 73 905 78 COLOUR_TEXT_REGION 73 905 78 905 51 STRAND 86 905 89 COLOUR_TEXT_REGION 86 905 89 905 51 STRAND 95 905 99 COLOUR_TEXT_REGION 95 905 99 905 51 STRAND 5 910 11 COLOUR_TEXT_REGION 5 910 11 910 51 STRAND 16 910 24 COLOUR_TEXT_REGION 16 910 24 910 51 STRAND 37 910 46 COLOUR_TEXT_REGION 37 910 46 910 51 STRAND 52 910 57 COLOUR_TEXT_REGION 52 910 57 910 51 STRAND 65 910 70 COLOUR_TEXT_REGION 65 910 70 910 51 STRAND 73 910 78 COLOUR_TEXT_REGION 73 910 78 910 51 STRAND 86 910 89 COLOUR_TEXT_REGION 86 910 89 910 51 STRAND 95 910 100 COLOUR_TEXT_REGION 95 910 100 910 51 STRAND 5 911 11 COLOUR_TEXT_REGION 5 911 11 911 51 STRAND 16 911 25 COLOUR_TEXT_REGION 16 911 25 911 51 STRAND 37 911 46 COLOUR_TEXT_REGION 37 911 46 911 51 STRAND 52 911 57 COLOUR_TEXT_REGION 52 911 57 911 51 STRAND 65 911 70 COLOUR_TEXT_REGION 65 911 70 911 51 STRAND 73 911 78 COLOUR_TEXT_REGION 73 911 78 911 51 STRAND 86 911 90 COLOUR_TEXT_REGION 86 911 90 911 51 STRAND 96 911 99 COLOUR_TEXT_REGION 96 911 99 911 51