SILENT_MODE
BLOCK_FILE jp_4CdkN65.concise.blc
MAX_NSEQ 924
MAX_INPUT_LEN 926
OUTPUT_FILE jp_4CdkN65.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 121 913   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 914 121 923 H SPACE
SUB_CHARS 1 914 121 923 E SPACE
SUB_CHARS 1 914 121 923 - SPACE
STRAND 18 917 25
COLOUR_TEXT_REGION 18 917 25 917 51
STRAND 29 917 37
COLOUR_TEXT_REGION 29 917 37 917 51
STRAND 47 917 52
COLOUR_TEXT_REGION 47 917 52 917 51
STRAND 57 917 65
COLOUR_TEXT_REGION 57 917 65 917 51
STRAND 69 917 77
COLOUR_TEXT_REGION 69 917 77 917 51
STRAND 81 917 82
COLOUR_TEXT_REGION 81 917 82 917 51
STRAND 92 917 94
COLOUR_TEXT_REGION 92 917 94 917 51
STRAND 99 917 105
COLOUR_TEXT_REGION 99 917 105 917 51
STRAND 111 917 119
COLOUR_TEXT_REGION 111 917 119 917 51
STRAND 18 922 25
COLOUR_TEXT_REGION 18 922 25 922 51
STRAND 29 922 37
COLOUR_TEXT_REGION 29 922 37 922 51
STRAND 47 922 52
COLOUR_TEXT_REGION 47 922 52 922 51
STRAND 57 922 65
COLOUR_TEXT_REGION 57 922 65 922 51
STRAND 69 922 77
COLOUR_TEXT_REGION 69 922 77 922 51
STRAND 81 922 82
COLOUR_TEXT_REGION 81 922 82 922 51
STRAND 92 922 94
COLOUR_TEXT_REGION 92 922 94 922 51
STRAND 99 922 105
COLOUR_TEXT_REGION 99 922 105 922 51
STRAND 111 922 119
COLOUR_TEXT_REGION 111 922 119 922 51
STRAND 19 923 25
COLOUR_TEXT_REGION 19 923 25 923 51
STRAND 27 923 37
COLOUR_TEXT_REGION 27 923 37 923 51
STRAND 48 923 52
COLOUR_TEXT_REGION 48 923 52 923 51
STRAND 57 923 65
COLOUR_TEXT_REGION 57 923 65 923 51
STRAND 69 923 76
COLOUR_TEXT_REGION 69 923 76 923 51
STRAND 81 923 82
COLOUR_TEXT_REGION 81 923 82 923 51
STRAND 92 923 94
COLOUR_TEXT_REGION 92 923 94 923 51
STRAND 99 923 107
COLOUR_TEXT_REGION 99 923 107 923 51
STRAND 110 923 119
COLOUR_TEXT_REGION 110 923 119 923 51