SILENT_MODE BLOCK_FILE jp_S6N2Ota.concise.blc MAX_NSEQ 288 MAX_INPUT_LEN 290 OUTPUT_FILE jp_S6N2Ota.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 186 277 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 278 186 287 H SPACE SUB_CHARS 1 278 186 287 E SPACE SUB_CHARS 1 278 186 287 - SPACE STRAND 4 281 11 COLOUR_TEXT_REGION 4 281 11 281 51 STRAND 18 281 25 COLOUR_TEXT_REGION 18 281 25 281 51 STRAND 29 281 38 COLOUR_TEXT_REGION 29 281 38 281 51 STRAND 43 281 52 COLOUR_TEXT_REGION 43 281 52 281 51 STRAND 57 281 67 COLOUR_TEXT_REGION 57 281 67 281 51 STRAND 72 281 78 COLOUR_TEXT_REGION 72 281 78 281 51 STRAND 84 281 86 COLOUR_TEXT_REGION 84 281 86 281 51 STRAND 101 281 105 COLOUR_TEXT_REGION 101 281 105 281 51 STRAND 125 281 133 COLOUR_TEXT_REGION 125 281 133 281 51 STRAND 138 281 142 COLOUR_TEXT_REGION 138 281 142 281 51 STRAND 144 281 149 COLOUR_TEXT_REGION 144 281 149 281 51 STRAND 153 281 158 COLOUR_TEXT_REGION 153 281 158 281 51 STRAND 164 281 170 COLOUR_TEXT_REGION 164 281 170 281 51 STRAND 175 281 178 COLOUR_TEXT_REGION 175 281 178 281 51 STRAND 183 281 184 COLOUR_TEXT_REGION 183 281 184 281 51 HELIX 108 281 115 COLOUR_TEXT_REGION 108 281 115 281 50 STRAND 4 286 10 COLOUR_TEXT_REGION 4 286 10 286 51 STRAND 18 286 25 COLOUR_TEXT_REGION 18 286 25 286 51 STRAND 29 286 38 COLOUR_TEXT_REGION 29 286 38 286 51 STRAND 44 286 52 COLOUR_TEXT_REGION 44 286 52 286 51 STRAND 57 286 67 COLOUR_TEXT_REGION 57 286 67 286 51 STRAND 72 286 78 COLOUR_TEXT_REGION 72 286 78 286 51 STRAND 84 286 86 COLOUR_TEXT_REGION 84 286 86 286 51 STRAND 101 286 105 COLOUR_TEXT_REGION 101 286 105 286 51 STRAND 125 286 133 COLOUR_TEXT_REGION 125 286 133 286 51 STRAND 138 286 142 COLOUR_TEXT_REGION 138 286 142 286 51 STRAND 145 286 148 COLOUR_TEXT_REGION 145 286 148 286 51 STRAND 153 286 158 COLOUR_TEXT_REGION 153 286 158 286 51 STRAND 164 286 170 COLOUR_TEXT_REGION 164 286 170 286 51 STRAND 175 286 177 COLOUR_TEXT_REGION 175 286 177 286 51 STRAND 183 286 184 COLOUR_TEXT_REGION 183 286 184 286 51 HELIX 111 286 112 COLOUR_TEXT_REGION 111 286 112 286 50 STRAND 4 287 11 COLOUR_TEXT_REGION 4 287 11 287 51 STRAND 19 287 26 COLOUR_TEXT_REGION 19 287 26 287 51 STRAND 29 287 38 COLOUR_TEXT_REGION 29 287 38 287 51 STRAND 43 287 52 COLOUR_TEXT_REGION 43 287 52 287 51 STRAND 57 287 67 COLOUR_TEXT_REGION 57 287 67 287 51 STRAND 72 287 78 COLOUR_TEXT_REGION 72 287 78 287 51 STRAND 84 287 86 COLOUR_TEXT_REGION 84 287 86 287 51 STRAND 99 287 105 COLOUR_TEXT_REGION 99 287 105 287 51 STRAND 125 287 133 COLOUR_TEXT_REGION 125 287 133 287 51 STRAND 138 287 149 COLOUR_TEXT_REGION 138 287 149 287 51 STRAND 153 287 158 COLOUR_TEXT_REGION 153 287 158 287 51 STRAND 164 287 170 COLOUR_TEXT_REGION 164 287 170 287 51 STRAND 175 287 178 COLOUR_TEXT_REGION 175 287 178 287 51 STRAND 183 287 184 COLOUR_TEXT_REGION 183 287 184 287 51 HELIX 107 287 116 COLOUR_TEXT_REGION 107 287 116 287 50