QUERY                  : LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELS : QUERY 
UniRef90_I3K951        : LPETPKTAAEMWQHSVIGDYLAKYRSDRRKAQAAMDTAWNSMEKKEKIPWIKKAAEDQKRYEREL- : UniRef90_I3K951
UniRef90_G5DXZ8        : LPETPKTAEEIWQQSVIGDYLARFKNDRVKALKCMETTWLNME-----MWIKKAAEDQKRYERELS : UniRef90_G5DXZ8
UniRef90_V9KEU9        : LPETPKTAEEMWQRSVVSEYLVRCKNDSRKAQAAMEMAWSALDKKQKIPWIKKAANDQKRYERELT : UniRef90_V9KEU9
UniRef90_S4RXC0        : -PETPKTAEEIFQQTKLVECLVKYKNDKKKALKALDAEWKGLDKKQKIFWIKAAAEDQKRYERELT : UniRef90_S4RXC0
UniRef90_H2TGZ4        : LPETPKTAEEMWQHSVIGDYLAKYRSDRRKAQVGMEAAWKSMEKKEKIPWIKKA------------ : UniRef90_H2TGZ4
UniRef90_P25979        : LPETPKTAEEIWQQSVIGDYLARFKNDRAKALKSMEGTWLNMEKKEKIMW---------------- : UniRef90_P25979
UniRef90_UPI00034F4F25 : -PEFPKWTEXIWQQSIICNYLAQLKNNQVKAPKAMKMTRNKTEKXEKLMWIQKLAEDRS-ITRRLS : UniRef90_UPI00034F4F25
UniRef90_UPI00034FBE9A : -PSAPQHSRTLRDPPVCP------QNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELS : UniRef90_UPI00034FBE9A
UniRef90_UPI0001CBB445 : ----PKTPEELWIESKTEEYVQKNKVTVGKANEALKDQWARLDKASKLPWQKEAAKQKKNIER--- : UniRef90_UPI0001CBB445
UniRef90_H2PA71        : -PKSPKRVQEIWQQSVISNYLACF-------------------KKENLM-IEKGAKDRKR--RELS : UniRef90_H2PA71
UniRef90_U6PIC3        : -PNAPKRAQSAYFHWLNENR-AKIKKDGDSAKRAGEM-WKAMDAESKAPWEKKAAADRERYESEM- : UniRef90_U6PIC3
UniRef90_A0A016TR84    : -PNAPKRA-----QSAYFHWLNENRTKIKKAKRAGEM-WKNMDAEAKQPWEKKAAADKDRYEAEM- : UniRef90_A0A016TR84

                       : 1---------11--------21--------31--------41--------51--------61---- :
OrigSeq                : LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELS : OrigSeq

Jnet                   : -------HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH--- : Jnet
jhmm                   : -------HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHHH-- : jhmm
jpssm                  : -------HHHHH-------HHHHH---HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH--- : jpssm

Lupas 14               : ------------------------------------------------------------------ : Lupas 14
Lupas 21               : ------------------------------------------------------------------ : Lupas 21
Lupas 28               : ------------------------------------------------------------------ : Lupas 28

Jnet_25                : -------B--BB---BB--BB--B------B--BB---B--B-----B-B---BB-----B---B- : Jnet_25
Jnet_5                 : --------------------B---------B----------------------------------- : Jnet_5
Jnet_0                 : --------------------B--------------------------------------------- : Jnet_0
Jnet Rel               : 999876415430321112532111076178999999998742242473178999994499874299 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.