SILENT_MODE
BLOCK_FILE jp_zO18QHe.concise.blc
MAX_NSEQ 107
MAX_INPUT_LEN 109
OUTPUT_FILE jp_zO18QHe.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 83 96   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 97 83 106 H SPACE
SUB_CHARS 1 97 83 106 E SPACE
SUB_CHARS 1 97 83 106 - SPACE
STRAND 13 100 17
COLOUR_TEXT_REGION 13 100 17 100 51
STRAND 28 100 30
COLOUR_TEXT_REGION 28 100 30 100 51
STRAND 60 100 63
COLOUR_TEXT_REGION 60 100 63 100 51
STRAND 66 100 67
COLOUR_TEXT_REGION 66 100 67 100 51
HELIX 35 100 41
COLOUR_TEXT_REGION 35 100 41 100 50
STRAND 13 105 17
COLOUR_TEXT_REGION 13 105 17 105 51
STRAND 26 105 30
COLOUR_TEXT_REGION 26 105 30 105 51
STRAND 60 105 63
COLOUR_TEXT_REGION 60 105 63 105 51
STRAND 66 105 67
COLOUR_TEXT_REGION 66 105 67 105 51
HELIX 35 105 41
COLOUR_TEXT_REGION 35 105 41 105 50
STRAND 13 106 17
COLOUR_TEXT_REGION 13 106 17 106 51
STRAND 29 106 30
COLOUR_TEXT_REGION 29 106 30 106 51
STRAND 60 106 62
COLOUR_TEXT_REGION 60 106 62 106 51
STRAND 66 106 67
COLOUR_TEXT_REGION 66 106 67 106 51
STRAND 74 106 75
COLOUR_TEXT_REGION 74 106 75 106 51
HELIX 33 106 40
COLOUR_TEXT_REGION 33 106 40 106 50