SILENT_MODE BLOCK_FILE jp_d3IJQ9z.concise.blc MAX_NSEQ 623 MAX_INPUT_LEN 625 OUTPUT_FILE jp_d3IJQ9z.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 99 612 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 613 99 622 H SPACE SUB_CHARS 1 613 99 622 E SPACE SUB_CHARS 1 613 99 622 - SPACE STRAND 40 616 44 COLOUR_TEXT_REGION 40 616 44 616 51 STRAND 75 616 78 COLOUR_TEXT_REGION 75 616 78 616 51 HELIX 2 616 10 COLOUR_TEXT_REGION 2 616 10 616 50 HELIX 14 616 33 COLOUR_TEXT_REGION 14 616 33 616 50 HELIX 48 616 54 COLOUR_TEXT_REGION 48 616 54 616 50 HELIX 58 616 67 COLOUR_TEXT_REGION 58 616 67 616 50 HELIX 84 616 97 COLOUR_TEXT_REGION 84 616 97 616 50 STRAND 40 621 44 COLOUR_TEXT_REGION 40 621 44 621 51 STRAND 75 621 78 COLOUR_TEXT_REGION 75 621 78 621 51 HELIX 0 621 10 COLOUR_TEXT_REGION 0 621 10 621 50 HELIX 14 621 33 COLOUR_TEXT_REGION 14 621 33 621 50 HELIX 48 621 54 COLOUR_TEXT_REGION 48 621 54 621 50 HELIX 58 621 67 COLOUR_TEXT_REGION 58 621 67 621 50 HELIX 84 621 97 COLOUR_TEXT_REGION 84 621 97 621 50 STRAND 40 622 44 COLOUR_TEXT_REGION 40 622 44 622 51 STRAND 75 622 78 COLOUR_TEXT_REGION 75 622 78 622 51 HELIX 2 622 10 COLOUR_TEXT_REGION 2 622 10 622 50 HELIX 14 622 32 COLOUR_TEXT_REGION 14 622 32 622 50 HELIX 48 622 54 COLOUR_TEXT_REGION 48 622 54 622 50 HELIX 58 622 67 COLOUR_TEXT_REGION 58 622 67 622 50 HELIX 84 622 97 COLOUR_TEXT_REGION 84 622 97 622 50