Jpred secondary structure prediction results

QUERY                  : MQCEEKLEVFENGFKDEKFNVEVKFYGNDARKVLLAMIYELYLPEYGREYVYPFECAKEFWNIYLEGEEIQDQLKPIKFTSEQVIKKLQEEIKKIKPPLEIKIEEAKIYKTKEGYLAVGNYFILDPRGRLFIFNKPSIANKILKYIWKW : QUERY 
UniRef90_F8AGZ0        : MQCEEKLEVFENGFEDGKFNIRVEVYGGDARKVLLALIYELYLPDYGSDYIYPFECAKEFWGIYMDGSEVEPELSEPKFVSRSVIDKLDKVLKGLDAPQEVKLERAKIYKVKEGYLAVGKNFLLDHRDRLFIFNKPSVAEMLLKYIGRW : UniRef90_F8AGZ0
UniRef90_F4HIM7        : MQCEEKLEVFENGFRDGKFNVEVEVYGKDGKRVLLALIYELYLPEYGPEYVYPFECAKEFWNIYIDSSEIQGELNPIKFMNEQVKRKIESMLKEINPPFEVDIENARVYKVKDGYLVIGRNYILDPKGRLFVFNKPSIGEKILKYIWKW : UniRef90_F4HIM7
UniRef90_Q9V140        : MMCEEKLEVFENGFRDDKFNIEVTFYGEDGRKVLLALIYELYLPDYGSEYVYPFECAKEFWNVYMDPPNVEKELKPIKFVSESVKQKVREVLEGINPPVDVKIDEAEFYKTKEGYLVIGKNFLLDPKGRLFIFNKPSIGEKILKYIWEW : UniRef90_Q9V140
UniRef90_C5A7E0        : MLCEEKLEIFENGFEDGKFKLRIEYYGKDARKLLLAVIRELYLPDYGEDYVYPFECAKEFWGIYLDPGEIKPDFSPVKFINRSVMNRLEKTLNEIDAPAEIKLEKAEVVKLKRALLALGKDFILDERGYLIVFSKPSARELILKYLG-- : UniRef90_C5A7E0
UniRef90_UPI00029B1854 : MLCEEKLEVFENGFEDGKFNLRVEFYGRDARKVLLAMIRELYLPDYGPEYVYPFECAKEFWGIPLEPGDITEDPSPVKFITQSIADRLEKALNDIGAPVEVKLDEAEVHRLKTGLLALGKNFVLDERKVLFVFNKPPARGLILKYLG-- : UniRef90_UPI00029B1854
UniRef90_I3RFM2        : MQCEEKLEVFENGFKDEKFNVEIRVIGGDARKILAAIIYELYLPEYGPEYVYPFECAKEFWSVYIDSSEIQGELKPIKFVSNQVRQKIEETIKDIEVPFEIELDKANVYKTKEGYLVVGSNFILDPKGRLFLFNKPSVAEMILKYIWKW : UniRef90_I3RFM2
UniRef90_I6UQZ5        : MLCEEKLEVFENGFKDDKHNIEIHVYGGDGRKVLLALIYELYSPEYGSEYVYPFECAKEFWGIYLDSSEVEAELKPLKFISESVKSKIEKELEDIKAPIEVELEKSTIYKVKDGYIVLGKNFLLDHKGRLFVFNKPQVGEIILKYIWKW : UniRef90_I6UQZ5
UniRef90_G0HN54        : MLCEEKLEVFENGFRDEKFNLEVEFYGKDARKLLLAVIRELYLPDYGEDYVYPFECAKEFWGIHLDPSEIVTEPSPIKFLNRSVLNRLEKALEETDAPREVKFEKAEVHKLKKGLLALGKNFILGEGAYLIVFNKPAARELILKYLG-- : UniRef90_G0HN54
UniRef90_F0LJJ4        : MQCEEKLEVFENGFADGKFNLRIEFYGSDARKILLAIIYELYLPDYGKEYVYPFECAKEFWGIYMDASEVEPELGKPKFVSRAVMDKLEAILENIEAPREVKLEKAEIYKLKGGLLALGKNFLLDGKNRLFIFNKPSARELLLKYIGRW : UniRef90_F0LJJ4
UniRef90_I3ZS54        : --------MFENGFEDGRFKLRVEFYGGDARRLLLAVIRELYLSDYGEDYVYPFECAKEFWGIYMDPSEIAARPNPIKFLNRAVLDRLEKALRETKAPEEINLERAEVHKLKKGLLALGKNFLLDERGYLIIFSKPSARELILKYLG-- : UniRef90_I3ZS54
UniRef90_C6A1R9        : MKCEEHLNIFENGFEDGKFNLKIEYYGKNARRILLAVIFELYSPIYGTEYVYPFECAKEFWGVYMESSEIVPELSRPKFITRALIDKAKSLLNEIEVPEEIKIETSEIYKFKDGLLVIGRNFLIDGGKKLFVFNKPHARELLIKYLGR- : UniRef90_C6A1R9
UniRef90_S5Z4J9        : MQCEEHLEVFENGFEDGKFNLRIEYYGGDARKVLLSIIYELYQPIYGSEYVYPFECAKEFWGIFMDYSEVVPELSKPKFISQALID--------------------------------------------------------------- : UniRef90_S5Z4J9

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141------ :
OrigSeq                : MQCEEKLEVFENGFKDEKFNVEVKFYGNDARKVLLAMIYELYLPEYGREYVYPFECAKEFWNIYLEGEEIQDQLKPIKFTSEQVIKKLQEEIKKIKPPLEIKIEEAKIYKTKEGYLAVGNYFILDPRGRLFIFNKPSIANKILKYIWKW : OrigSeq

Jnet                   : ---HHHHHHHH-------EEEEEEEE---HHHHHHHHHHHHH------------HHHHHH--EEE------------HHHHHHHHHHHHHHHH-------EE----HHHHHHHHHHHH----------EEEEE----HHHHHHHHHH-- : Jnet
jhmm                   : ----HHHHHHH-------EEEEEEEE---HHHHHHHHHHHHH--------EE----HHHHH-EEE-------------HHHHHHHHHHHHHHH-------------HHHHHHHHHHHH--HHHH----EEEEE----HHHHHHHHHH-- : jhmm
jpssm                  : --HHHHHHHHH-------EEEEEEEE---HHHHHHHHHHHHH------------HHHHHH--EE-------------HHHHHHHHHHHHHHHH------EEEEE--EEEEE---HEEE----------EEEEE----HHHHHHHHH--- : jpssm

Lupas 14               : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21               : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28               : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25                : --B---B-BB--BB----B-B-B-BBB--B--BBBBBBBBBBBB-BB--BBBBB-BB--BBBBBB----B---B--B-BB---BB--B--BB--B-B---B-B--B-BB-B--BBBBBB--BBB----BBBBBB-B-BB-BBB-BB--- : Jnet_25
Jnet_5                 : --------------------B-B---------BBB-BB--B---------B--B-BB--BB-B-B----B---------B---B---B-------------------B-------BBBB---B------BBBB--------BB------ : Jnet_5
Jnet_0                 : ----------------------B---------BB--B--------------------------------------------------B-----------------------------------------B-B---------B------- : Jnet_0
Jnet Rel               : 97129999875168887458888885487178999999998515788776213301221002221677777777652289999999999987247887110013651012330324211510127773478744774689999986299 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.