SILENT_MODE BLOCK_FILE jp_EclpptW.concise.blc MAX_NSEQ 881 MAX_INPUT_LEN 883 OUTPUT_FILE jp_EclpptW.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 107 870 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 871 107 880 H SPACE SUB_CHARS 1 871 107 880 E SPACE SUB_CHARS 1 871 107 880 - SPACE STRAND 35 874 41 COLOUR_TEXT_REGION 35 874 41 874 51 STRAND 76 874 81 COLOUR_TEXT_REGION 76 874 81 874 51 STRAND 102 874 106 COLOUR_TEXT_REGION 102 874 106 874 51 HELIX 15 874 30 COLOUR_TEXT_REGION 15 874 30 874 50 HELIX 49 874 68 COLOUR_TEXT_REGION 49 874 68 874 50 HELIX 93 874 97 COLOUR_TEXT_REGION 93 874 97 874 50 STRAND 35 879 41 COLOUR_TEXT_REGION 35 879 41 879 51 STRAND 76 879 81 COLOUR_TEXT_REGION 76 879 81 879 51 STRAND 102 879 106 COLOUR_TEXT_REGION 102 879 106 879 51 HELIX 15 879 30 COLOUR_TEXT_REGION 15 879 30 879 50 HELIX 48 879 68 COLOUR_TEXT_REGION 48 879 68 879 50 HELIX 93 879 98 COLOUR_TEXT_REGION 93 879 98 879 50 STRAND 34 880 41 COLOUR_TEXT_REGION 34 880 41 880 51 STRAND 75 880 80 COLOUR_TEXT_REGION 75 880 80 880 51 STRAND 101 880 106 COLOUR_TEXT_REGION 101 880 106 880 51 HELIX 15 880 30 COLOUR_TEXT_REGION 15 880 30 880 50 HELIX 52 880 67 COLOUR_TEXT_REGION 52 880 67 880 50