SILENT_MODE BLOCK_FILE jp_OJOmZcR.concise.blc MAX_NSEQ 145 MAX_INPUT_LEN 147 OUTPUT_FILE jp_OJOmZcR.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 120 134 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 135 120 144 H SPACE SUB_CHARS 1 135 120 144 E SPACE SUB_CHARS 1 135 120 144 - SPACE HELIX 3 138 24 COLOUR_TEXT_REGION 3 138 24 138 50 HELIX 35 138 61 COLOUR_TEXT_REGION 35 138 61 138 50 HELIX 69 138 85 COLOUR_TEXT_REGION 69 138 85 138 50 HELIX 93 138 116 COLOUR_TEXT_REGION 93 138 116 138 50 HELIX 3 143 24 COLOUR_TEXT_REGION 3 143 24 143 50 HELIX 38 143 61 COLOUR_TEXT_REGION 38 143 61 143 50 HELIX 69 143 85 COLOUR_TEXT_REGION 69 143 85 143 50 HELIX 93 143 116 COLOUR_TEXT_REGION 93 143 116 143 50 HELIX 3 144 24 COLOUR_TEXT_REGION 3 144 24 144 50 HELIX 34 144 61 COLOUR_TEXT_REGION 34 144 61 144 50 HELIX 69 144 86 COLOUR_TEXT_REGION 69 144 86 144 50 HELIX 93 144 116 COLOUR_TEXT_REGION 93 144 116 144 50