SILENT_MODE BLOCK_FILE jp_RecnVHh.concise.blc MAX_NSEQ 755 MAX_INPUT_LEN 757 OUTPUT_FILE jp_RecnVHh.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 223 744 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 745 223 754 H SPACE SUB_CHARS 1 745 223 754 E SPACE SUB_CHARS 1 745 223 754 - SPACE STRAND 57 748 61 COLOUR_TEXT_REGION 57 748 61 748 51 STRAND 72 748 78 COLOUR_TEXT_REGION 72 748 78 748 51 STRAND 126 748 129 COLOUR_TEXT_REGION 126 748 129 748 51 STRAND 160 748 164 COLOUR_TEXT_REGION 160 748 164 748 51 STRAND 181 748 185 COLOUR_TEXT_REGION 181 748 185 748 51 HELIX 8 748 15 COLOUR_TEXT_REGION 8 748 15 748 50 HELIX 18 748 33 COLOUR_TEXT_REGION 18 748 33 748 50 HELIX 44 748 50 COLOUR_TEXT_REGION 44 748 50 748 50 HELIX 87 748 98 COLOUR_TEXT_REGION 87 748 98 748 50 HELIX 111 748 121 COLOUR_TEXT_REGION 111 748 121 748 50 HELIX 141 748 154 COLOUR_TEXT_REGION 141 748 154 748 50 HELIX 167 748 173 COLOUR_TEXT_REGION 167 748 173 748 50 HELIX 202 748 213 COLOUR_TEXT_REGION 202 748 213 748 50 STRAND 57 753 61 COLOUR_TEXT_REGION 57 753 61 753 51 STRAND 72 753 77 COLOUR_TEXT_REGION 72 753 77 753 51 STRAND 125 753 129 COLOUR_TEXT_REGION 125 753 129 753 51 STRAND 160 753 164 COLOUR_TEXT_REGION 160 753 164 753 51 STRAND 181 753 185 COLOUR_TEXT_REGION 181 753 185 753 51 HELIX 8 753 12 COLOUR_TEXT_REGION 8 753 12 753 50 HELIX 19 753 33 COLOUR_TEXT_REGION 19 753 33 753 50 HELIX 44 753 49 COLOUR_TEXT_REGION 44 753 49 753 50 HELIX 87 753 98 COLOUR_TEXT_REGION 87 753 98 753 50 HELIX 111 753 122 COLOUR_TEXT_REGION 111 753 122 753 50 HELIX 141 753 153 COLOUR_TEXT_REGION 141 753 153 753 50 HELIX 167 753 173 COLOUR_TEXT_REGION 167 753 173 753 50 HELIX 202 753 213 COLOUR_TEXT_REGION 202 753 213 753 50 STRAND 56 754 62 COLOUR_TEXT_REGION 56 754 62 754 51 STRAND 72 754 78 COLOUR_TEXT_REGION 72 754 78 754 51 STRAND 121 754 122 COLOUR_TEXT_REGION 121 754 122 754 51 STRAND 127 754 129 COLOUR_TEXT_REGION 127 754 129 754 51 STRAND 159 754 164 COLOUR_TEXT_REGION 159 754 164 754 51 STRAND 181 754 185 COLOUR_TEXT_REGION 181 754 185 754 51 HELIX 8 754 15 COLOUR_TEXT_REGION 8 754 15 754 50 HELIX 18 754 33 COLOUR_TEXT_REGION 18 754 33 754 50 HELIX 44 754 50 COLOUR_TEXT_REGION 44 754 50 754 50 HELIX 87 754 98 COLOUR_TEXT_REGION 87 754 98 754 50 HELIX 111 754 116 COLOUR_TEXT_REGION 111 754 116 754 50 HELIX 142 754 154 COLOUR_TEXT_REGION 142 754 154 754 50 HELIX 166 754 172 COLOUR_TEXT_REGION 166 754 172 754 50 HELIX 203 754 212 COLOUR_TEXT_REGION 203 754 212 754 50