SILENT_MODE BLOCK_FILE jp_DnUiJuw.concise.blc MAX_NSEQ 210 MAX_INPUT_LEN 212 OUTPUT_FILE jp_DnUiJuw.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 305 199 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 200 305 209 H SPACE SUB_CHARS 1 200 305 209 E SPACE SUB_CHARS 1 200 305 209 - SPACE STRAND 33 203 36 COLOUR_TEXT_REGION 33 203 36 203 51 STRAND 52 203 56 COLOUR_TEXT_REGION 52 203 56 203 51 STRAND 92 203 97 COLOUR_TEXT_REGION 92 203 97 203 51 STRAND 152 203 157 COLOUR_TEXT_REGION 152 203 157 203 51 STRAND 163 203 168 COLOUR_TEXT_REGION 163 203 168 203 51 STRAND 224 203 228 COLOUR_TEXT_REGION 224 203 228 203 51 STRAND 234 203 240 COLOUR_TEXT_REGION 234 203 240 203 51 STRAND 246 203 250 COLOUR_TEXT_REGION 246 203 250 203 51 STRAND 256 203 259 COLOUR_TEXT_REGION 256 203 259 203 51 STRAND 302 203 302 COLOUR_TEXT_REGION 302 203 302 203 51 HELIX 3 203 24 COLOUR_TEXT_REGION 3 203 24 203 50 HELIX 60 203 74 COLOUR_TEXT_REGION 60 203 74 203 50 HELIX 103 203 127 COLOUR_TEXT_REGION 103 203 127 203 50 HELIX 132 203 142 COLOUR_TEXT_REGION 132 203 142 203 50 HELIX 148 203 151 COLOUR_TEXT_REGION 148 203 151 203 50 HELIX 179 203 191 COLOUR_TEXT_REGION 179 203 191 203 50 HELIX 201 203 216 COLOUR_TEXT_REGION 201 203 216 203 50 STRAND 33 208 36 COLOUR_TEXT_REGION 33 208 36 208 51 STRAND 86 208 86 COLOUR_TEXT_REGION 86 208 86 208 51 STRAND 92 208 96 COLOUR_TEXT_REGION 92 208 96 208 51 STRAND 151 208 157 COLOUR_TEXT_REGION 151 208 157 208 51 STRAND 163 208 168 COLOUR_TEXT_REGION 163 208 168 208 51 STRAND 224 208 228 COLOUR_TEXT_REGION 224 208 228 208 51 STRAND 234 208 240 COLOUR_TEXT_REGION 234 208 240 208 51 STRAND 246 208 250 COLOUR_TEXT_REGION 246 208 250 208 51 STRAND 256 208 258 COLOUR_TEXT_REGION 256 208 258 208 51 HELIX 3 208 24 COLOUR_TEXT_REGION 3 208 24 208 50 HELIX 60 208 74 COLOUR_TEXT_REGION 60 208 74 208 50 HELIX 103 208 127 COLOUR_TEXT_REGION 103 208 127 208 50 HELIX 132 208 142 COLOUR_TEXT_REGION 132 208 142 208 50 HELIX 148 208 150 COLOUR_TEXT_REGION 148 208 150 208 50 HELIX 179 208 191 COLOUR_TEXT_REGION 179 208 191 208 50 HELIX 204 208 216 COLOUR_TEXT_REGION 204 208 216 208 50 STRAND 30 209 36 COLOUR_TEXT_REGION 30 209 36 209 51 STRAND 52 209 57 COLOUR_TEXT_REGION 52 209 57 209 51 STRAND 92 209 97 COLOUR_TEXT_REGION 92 209 97 209 51 STRAND 152 209 157 COLOUR_TEXT_REGION 152 209 157 209 51 STRAND 163 209 169 COLOUR_TEXT_REGION 163 209 169 209 51 STRAND 223 209 227 COLOUR_TEXT_REGION 223 209 227 209 51 STRAND 233 209 241 COLOUR_TEXT_REGION 233 209 241 209 51 STRAND 246 209 250 COLOUR_TEXT_REGION 246 209 250 209 51 STRAND 255 209 259 COLOUR_TEXT_REGION 255 209 259 209 51 STRAND 301 209 303 COLOUR_TEXT_REGION 301 209 303 209 51 HELIX 2 209 25 COLOUR_TEXT_REGION 2 209 25 209 50 HELIX 60 209 74 COLOUR_TEXT_REGION 60 209 74 209 50 HELIX 85 209 87 COLOUR_TEXT_REGION 85 209 87 209 50 HELIX 102 209 127 COLOUR_TEXT_REGION 102 209 127 209 50 HELIX 132 209 143 COLOUR_TEXT_REGION 132 209 143 209 50 HELIX 147 209 150 COLOUR_TEXT_REGION 147 209 150 209 50 HELIX 179 209 191 COLOUR_TEXT_REGION 179 209 191 209 50 HELIX 201 209 216 COLOUR_TEXT_REGION 201 209 216 209 50 HELIX 295 209 298 COLOUR_TEXT_REGION 295 209 298 209 50