SILENT_MODE BLOCK_FILE jp_3bHek5_.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_3bHek5_.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 246 37 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 38 246 47 H SPACE SUB_CHARS 1 38 246 47 E SPACE SUB_CHARS 1 38 246 47 - SPACE STRAND 4 41 6 COLOUR_TEXT_REGION 4 41 6 41 51 STRAND 12 41 17 COLOUR_TEXT_REGION 12 41 17 41 51 STRAND 25 41 29 COLOUR_TEXT_REGION 25 41 29 41 51 STRAND 35 41 36 COLOUR_TEXT_REGION 35 41 36 41 51 STRAND 47 41 52 COLOUR_TEXT_REGION 47 41 52 41 51 STRAND 58 41 63 COLOUR_TEXT_REGION 58 41 63 41 51 STRAND 70 41 75 COLOUR_TEXT_REGION 70 41 75 41 51 STRAND 81 41 88 COLOUR_TEXT_REGION 81 41 88 41 51 STRAND 108 41 112 COLOUR_TEXT_REGION 108 41 112 41 51 STRAND 117 41 122 COLOUR_TEXT_REGION 117 41 122 41 51 STRAND 138 41 141 COLOUR_TEXT_REGION 138 41 141 41 51 STRAND 149 41 161 COLOUR_TEXT_REGION 149 41 161 41 51 STRAND 163 41 163 COLOUR_TEXT_REGION 163 41 163 41 51 STRAND 170 41 174 COLOUR_TEXT_REGION 170 41 174 41 51 STRAND 195 41 200 COLOUR_TEXT_REGION 195 41 200 41 51 STRAND 206 41 211 COLOUR_TEXT_REGION 206 41 211 41 51 STRAND 216 41 220 COLOUR_TEXT_REGION 216 41 220 41 51 HELIX 30 41 34 COLOUR_TEXT_REGION 30 41 34 41 50 HELIX 96 41 101 COLOUR_TEXT_REGION 96 41 101 41 50 HELIX 132 41 136 COLOUR_TEXT_REGION 132 41 136 41 50 HELIX 234 41 244 COLOUR_TEXT_REGION 234 41 244 41 50 STRAND 4 46 6 COLOUR_TEXT_REGION 4 46 6 46 51 STRAND 12 46 16 COLOUR_TEXT_REGION 12 46 16 46 51 STRAND 25 46 28 COLOUR_TEXT_REGION 25 46 28 46 51 STRAND 48 46 51 COLOUR_TEXT_REGION 48 46 51 46 51 STRAND 59 46 63 COLOUR_TEXT_REGION 59 46 63 46 51 STRAND 70 46 76 COLOUR_TEXT_REGION 70 46 76 46 51 STRAND 108 46 111 COLOUR_TEXT_REGION 108 46 111 46 51 STRAND 117 46 122 COLOUR_TEXT_REGION 117 46 122 46 51 STRAND 138 46 140 COLOUR_TEXT_REGION 138 46 140 46 51 STRAND 149 46 153 COLOUR_TEXT_REGION 149 46 153 46 51 STRAND 158 46 161 COLOUR_TEXT_REGION 158 46 161 46 51 STRAND 170 46 174 COLOUR_TEXT_REGION 170 46 174 46 51 STRAND 196 46 199 COLOUR_TEXT_REGION 196 46 199 46 51 STRAND 207 46 211 COLOUR_TEXT_REGION 207 46 211 46 51 STRAND 216 46 219 COLOUR_TEXT_REGION 216 46 219 46 51 HELIX 29 46 35 COLOUR_TEXT_REGION 29 46 35 46 50 HELIX 82 46 88 COLOUR_TEXT_REGION 82 46 88 46 50 HELIX 96 46 100 COLOUR_TEXT_REGION 96 46 100 46 50 HELIX 132 46 137 COLOUR_TEXT_REGION 132 46 137 46 50 HELIX 234 46 244 COLOUR_TEXT_REGION 234 46 244 46 50 STRAND 3 47 6 COLOUR_TEXT_REGION 3 47 6 47 51 STRAND 12 47 17 COLOUR_TEXT_REGION 12 47 17 47 51 STRAND 25 47 30 COLOUR_TEXT_REGION 25 47 30 47 51 STRAND 33 47 38 COLOUR_TEXT_REGION 33 47 38 47 51 STRAND 47 47 52 COLOUR_TEXT_REGION 47 47 52 47 51 STRAND 58 47 64 COLOUR_TEXT_REGION 58 47 64 47 51 STRAND 70 47 75 COLOUR_TEXT_REGION 70 47 75 47 51 STRAND 81 47 88 COLOUR_TEXT_REGION 81 47 88 47 51 STRAND 108 47 112 COLOUR_TEXT_REGION 108 47 112 47 51 STRAND 117 47 121 COLOUR_TEXT_REGION 117 47 121 47 51 STRAND 131 47 132 COLOUR_TEXT_REGION 131 47 132 47 51 STRAND 138 47 144 COLOUR_TEXT_REGION 138 47 144 47 51 STRAND 149 47 164 COLOUR_TEXT_REGION 149 47 164 47 51 STRAND 170 47 175 COLOUR_TEXT_REGION 170 47 175 47 51 STRAND 187 47 189 COLOUR_TEXT_REGION 187 47 189 47 51 STRAND 195 47 200 COLOUR_TEXT_REGION 195 47 200 47 51 STRAND 205 47 210 COLOUR_TEXT_REGION 205 47 210 47 51 STRAND 216 47 221 COLOUR_TEXT_REGION 216 47 221 47 51 STRAND 232 47 235 COLOUR_TEXT_REGION 232 47 235 47 51 HELIX 95 47 101 COLOUR_TEXT_REGION 95 47 101 47 50 HELIX 133 47 134 COLOUR_TEXT_REGION 133 47 134 47 50 HELIX 238 47 244 COLOUR_TEXT_REGION 238 47 244 47 50