SILENT_MODE BLOCK_FILE jp_64Vq2wp.concise.blc MAX_NSEQ 58 MAX_INPUT_LEN 60 OUTPUT_FILE jp_64Vq2wp.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 221 47 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 48 221 57 H SPACE SUB_CHARS 1 48 221 57 E SPACE SUB_CHARS 1 48 221 57 - SPACE STRAND 29 51 34 COLOUR_TEXT_REGION 29 51 34 51 51 STRAND 38 51 40 COLOUR_TEXT_REGION 38 51 40 51 51 STRAND 69 51 72 COLOUR_TEXT_REGION 69 51 72 51 51 STRAND 88 51 93 COLOUR_TEXT_REGION 88 51 93 51 51 STRAND 96 51 100 COLOUR_TEXT_REGION 96 51 100 51 51 STRAND 125 51 132 COLOUR_TEXT_REGION 125 51 132 51 51 STRAND 150 51 158 COLOUR_TEXT_REGION 150 51 158 51 51 STRAND 170 51 171 COLOUR_TEXT_REGION 170 51 171 51 51 HELIX 47 51 65 COLOUR_TEXT_REGION 47 51 65 51 50 HELIX 81 51 87 COLOUR_TEXT_REGION 81 51 87 51 50 HELIX 136 51 143 COLOUR_TEXT_REGION 136 51 143 51 50 HELIX 180 51 218 COLOUR_TEXT_REGION 180 51 218 51 50 STRAND 29 56 33 COLOUR_TEXT_REGION 29 56 33 56 51 STRAND 38 56 40 COLOUR_TEXT_REGION 38 56 40 56 51 STRAND 69 56 72 COLOUR_TEXT_REGION 69 56 72 56 51 STRAND 89 56 93 COLOUR_TEXT_REGION 89 56 93 56 51 STRAND 96 56 100 COLOUR_TEXT_REGION 96 56 100 56 51 STRAND 124 56 132 COLOUR_TEXT_REGION 124 56 132 56 51 STRAND 150 56 158 COLOUR_TEXT_REGION 150 56 158 56 51 STRAND 169 56 171 COLOUR_TEXT_REGION 169 56 171 56 51 HELIX 48 56 65 COLOUR_TEXT_REGION 48 56 65 56 50 HELIX 81 56 88 COLOUR_TEXT_REGION 81 56 88 56 50 HELIX 135 56 142 COLOUR_TEXT_REGION 135 56 142 56 50 HELIX 180 56 202 COLOUR_TEXT_REGION 180 56 202 56 50 HELIX 204 56 218 COLOUR_TEXT_REGION 204 56 218 56 50 STRAND 30 57 34 COLOUR_TEXT_REGION 30 57 34 57 51 STRAND 38 57 40 COLOUR_TEXT_REGION 38 57 40 57 51 STRAND 69 57 72 COLOUR_TEXT_REGION 69 57 72 57 51 STRAND 88 57 93 COLOUR_TEXT_REGION 88 57 93 57 51 STRAND 96 57 99 COLOUR_TEXT_REGION 96 57 99 57 51 STRAND 125 57 132 COLOUR_TEXT_REGION 125 57 132 57 51 STRAND 150 57 159 COLOUR_TEXT_REGION 150 57 159 57 51 HELIX 45 57 65 COLOUR_TEXT_REGION 45 57 65 57 50 HELIX 81 57 85 COLOUR_TEXT_REGION 81 57 85 57 50 HELIX 116 57 121 COLOUR_TEXT_REGION 116 57 121 57 50 HELIX 136 57 143 COLOUR_TEXT_REGION 136 57 143 57 50 HELIX 180 57 218 COLOUR_TEXT_REGION 180 57 218 57 50