SILENT_MODE BLOCK_FILE jp_ZkgzrrT.concise.blc MAX_NSEQ 1221 MAX_INPUT_LEN 1223 OUTPUT_FILE jp_ZkgzrrT.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 210 1210 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1211 210 1220 H SPACE SUB_CHARS 1 1211 210 1220 E SPACE SUB_CHARS 1 1211 210 1220 - SPACE STRAND 42 1214 47 COLOUR_TEXT_REGION 42 1214 47 1214 51 STRAND 54 1214 56 COLOUR_TEXT_REGION 54 1214 56 1214 51 STRAND 90 1214 95 COLOUR_TEXT_REGION 90 1214 95 1214 51 STRAND 106 1214 107 COLOUR_TEXT_REGION 106 1214 107 1214 51 STRAND 115 1214 118 COLOUR_TEXT_REGION 115 1214 118 1214 51 STRAND 131 1214 137 COLOUR_TEXT_REGION 131 1214 137 1214 51 STRAND 187 1214 191 COLOUR_TEXT_REGION 187 1214 191 1214 51 HELIX 9 1214 16 COLOUR_TEXT_REGION 9 1214 16 1214 50 HELIX 82 1214 85 COLOUR_TEXT_REGION 82 1214 85 1214 50 HELIX 157 1214 163 COLOUR_TEXT_REGION 157 1214 163 1214 50 HELIX 170 1214 177 COLOUR_TEXT_REGION 170 1214 177 1214 50 HELIX 204 1214 206 COLOUR_TEXT_REGION 204 1214 206 1214 50 STRAND 42 1219 47 COLOUR_TEXT_REGION 42 1219 47 1219 51 STRAND 54 1219 57 COLOUR_TEXT_REGION 54 1219 57 1219 51 STRAND 90 1219 94 COLOUR_TEXT_REGION 90 1219 94 1219 51 STRAND 105 1219 108 COLOUR_TEXT_REGION 105 1219 108 1219 51 STRAND 116 1219 119 COLOUR_TEXT_REGION 116 1219 119 1219 51 STRAND 130 1219 137 COLOUR_TEXT_REGION 130 1219 137 1219 51 STRAND 187 1219 191 COLOUR_TEXT_REGION 187 1219 191 1219 51 HELIX 9 1219 16 COLOUR_TEXT_REGION 9 1219 16 1219 50 HELIX 81 1219 86 COLOUR_TEXT_REGION 81 1219 86 1219 50 HELIX 159 1219 162 COLOUR_TEXT_REGION 159 1219 162 1219 50 HELIX 170 1219 177 COLOUR_TEXT_REGION 170 1219 177 1219 50 HELIX 204 1219 208 COLOUR_TEXT_REGION 204 1219 208 1219 50 STRAND 41 1220 47 COLOUR_TEXT_REGION 41 1220 47 1220 51 STRAND 53 1220 56 COLOUR_TEXT_REGION 53 1220 56 1220 51 STRAND 90 1220 96 COLOUR_TEXT_REGION 90 1220 96 1220 51 STRAND 114 1220 115 COLOUR_TEXT_REGION 114 1220 115 1220 51 STRAND 131 1220 137 COLOUR_TEXT_REGION 131 1220 137 1220 51 STRAND 187 1220 192 COLOUR_TEXT_REGION 187 1220 192 1220 51 HELIX 9 1220 16 COLOUR_TEXT_REGION 9 1220 16 1220 50 HELIX 157 1220 164 COLOUR_TEXT_REGION 157 1220 164 1220 50 HELIX 171 1220 177 COLOUR_TEXT_REGION 171 1220 177 1220 50