Jpred secondary structure prediction results

QUERY           : MKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLKVNQFYRHAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDEIMAKADNDLSYFISQNKNFQELWDKAVKLTKEMKIKLKGQKLDLRDGEVAINKVRELFGSDKNVKELWWFRSLLVKGVYLIKRYYEGDIELKTTSDFAKAVFED : QUERY 
UniRef90_B3PN83 : MKLRVPNPKRPNLPSLKAVKNEVVTLNELDKIIRLTNEDKTKEVIAQFRSKLNEFYQHAFNILEEYEGIEKHDDIFKMMFLKLKVVLDIQRKEPNNVEQIKRNINILDDIMKSADNELSYFVSQDLKFQALWDKAVLLSKTMKAEFKTSRPSTVDPYGPVNSVEKFFGADEDVKTIKWFKSLLIRAANYLIHYYDAPEVFQPKTDFEKAIFE- : UniRef90_B3PN83

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211 :
OrigSeq         : MKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLKVNQFYRHAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDEIMAKADNDLSYFISQNKNFQELWDKAVKLTKEMKIKLKGQKLDLRDGEVAINKVRELFGSDKNVKELWWFRSLLVKGVYLIKRYYEGDIELKTTSDFAKAVFED : OrigSeq

Jnet            : -------------HHHHH---EEEEHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH------HHH-----HHHHHHHHHHH-HHHHHHH-------------HHHHHHHH------HHHHHHHHHHHHHHHHHHHH-----EE-----HHHHH--- : Jnet
jhmm            : -------------HHHHH---EEEEHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHEHHHH------HHHHHHHHHHHHHHHHH------EEE-----HHHHHHHHHHHHHHHHHHH-------------EEEEEEEE------HHHHHHHHHHHHHHHHHHHH-----EE------HHHH--- : jhmm
jpssm           : --EE---------HHHHH--HHEEH---HHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH------HHHHH----HHHHHHHHHHH-HHHHEEE-----------HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH-----EE-----HHHHH--- : jpssm

Lupas 14        : --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21        : ------------------------------------------------------------------------------------------------ccccccccccccccccccccc------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28        : --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25         : --B-B---------BB--B--BBBBB--B--BB-B-----B--BB--B---B--BB-BBB-BB--B-BB--B--BB-BBBB-B-BBB-B-------B--B---B-BB--BB--B---BBBBB-----B--BB--BB-BB--B-B-B----B------BBB--B--BB-----B--B-BBBBBBB-BBBBBB-BB-B---B-----B---BB-- : Jnet_25
Jnet_5          : ---------------B------B-----B--B-----------BB--B---B------B--BB-----------BB-BBBB-B-BB-------------B---B--B--B-------B---B------------B------------------------B--B---------B--B--B---BB--B--B----------------------- : Jnet_5
Jnet_0          : ----------------------------------------------------------B---------------------------------------------------------------------------------------------------------------------------------------------------------- : Jnet_0
Jnet Rel        : 874337888776423442000100023314433158751399999999999999999863267721123228999887665322112212788763789998758999988517876422002357568999999862023314321578877777432123444204787747899999999999999998527871441566315543499 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.