JALVIEW_ANNOTATION # Created by concise2jalview using 'jp_byPUizW.concise' as input NO_GRAPH Lupas_21 Coiled-coil prediction windowed over 21 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|c|c|c|c|c|c|c|c|c|c|c|c|c|c|c|c|c|c|c|c|c|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_14 Coiled-coil prediction windowed over 14 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_28 Coiled-coil prediction windowed over 28 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH jnetpred Final secondary structure prediction by Jnet |||||||||||||H|H|H|H|H||||E|E|E|E|H|H|H|H|H|H|H|H|H||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||H|H|H||||||H|H|H|H|H|H|H|H|H|H|H||H|H|H|H|H|H|H||||||||||||||H|H|H|H|H|H|H|H|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||E|E||||||H|H|H|H|H||| BAR_GRAPH JNETCONF Confidence of Jnet prediction 0 (low) -> 9 (high) 8|7|4|3|3|7|8|8|8|7|7|6|4|2|3|4|4|2|0|0|0|1|0|0|0|2|3|3|1|4|4|3|3|1|5|8|7|5|1|3|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|8|6|3|2|6|7|7|2|1|1|2|3|2|2|8|9|9|9|8|8|7|6|6|5|3|2|2|1|1|2|2|1|2|7|8|8|7|6|3|7|8|9|9|9|8|7|5|8|9|9|9|9|8|8|5|1|7|8|7|6|4|2|2|0|0|2|3|5|7|5|6|8|9|9|9|9|9|9|8|6|2|0|2|3|3|1|4|3|2|1|5|7|8|8|7|7|7|7|7|4|3|2|1|2|3|4|4|4|2|0|4|7|8|7|7|4|7|8|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|8|5|2|7|8|7|1|4|4|1|5|6|6|3|1|5|5|4|3|4|9|9 NO_GRAPH JNETSOL25 Jnet solvent relative accessibility prediction at 25% cut-off -|-|B|-|B|-|-|-|-|-|-|-|-|-|B|B|-|-|B|-|-|B|B|B|B|B|-|-|B|-|-|B|B|-|B|-|-|-|-|-|B|-|-|B|B|-|-|B|-|-|-|B|-|-|B|B|-|B|B|B|-|B|B|-|-|B|-|B|B|-|-|B|-|-|B|B|-|B|B|B|B|-|B|-|B|B|B|-|B|-|-|-|-|-|-|-|B|-|-|B|-|-|-|B|-|B|B|-|-|B|B|-|-|B|-|-|-|B|B|B|B|B|-|-|-|-|-|B|-|-|B|B|-|-|B|B|-|B|B|-|-|B|-|B|-|B|-|-|-|-|B|-|-|-|-|-|-|B|B|B|-|-|B|-|-|B|B|-|-|-|-|-|B|-|-|B|-|B|B|B|B|B|B|B|-|B|B|B|B|B|B|-|B|B|-|B|-|-|-|B|-|-|-|-|-|B|-|-|-|B|B|-|- NO_GRAPH JNETSOL5 Jnet solvent relative accessibility prediction at 5% cut-off -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|B|-|-|-|-|-|B|-|-|B|-|-|-|-|-|-|-|-|-|-|-|B|B|-|-|B|-|-|-|B|-|-|-|-|-|-|B|-|-|B|B|-|-|-|-|-|-|-|-|-|-|-|B|B|-|B|B|B|B|-|B|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|B|-|-|B|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|B|-|-|-|-|-|-|-|-|-|B|-|-|B|-|-|B|-|-|-|B|B|-|-|B|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETSOL0 Jnet solvent relative accessibility prediction at 0% cut-off -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETHMM Jnet prediction using HMMer profiles |||||||||||||H|H|H|H|H||||E|E|E|E|H|H|H|H|H|H|H|H|H|||||H||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|E|H|H|H|H|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||E|E|E||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||||||E|E|E|E|E|E|E|E|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||E|E|||||||H|H|H|H||| NO_GRAPH JNETPSSM Jnet prediction using PSSM profiles ||E|E||||||||||H|H|H|H|H|||H|H|E|E|H||||H|H|H|H|H|H||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|H|H||H|H|H|H|E|E|E||||||||||||H|H|H|H|H|H|H|H|H|H|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||E|E||||||H|H|H|H|H||| NO_GRAPH JNETJURY Positions where Jnet predictions do not agree | |*|*| | | | | | | | | | | | | | | | |*|*| | |*|*|*|*| | | | | | | | | | |*|*| | | | | | | | | | | | | | | | | | | | | | | | |*|*|*|*| | | | | | | | | | | | | | | | | |*| | | |*| | | | | | | | | | | | | | | | | | | | | | |*| | | | | |*|*|*|*|*| | | | | | | | | | | | | | | |*| | | | |*|*|*| | | | | | | | | | | |*|*|*|*|*|*|*|*|*|*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*| | | | | | |