SILENT_MODE BLOCK_FILE jp_PulDLeP.concise.blc MAX_NSEQ 1054 MAX_INPUT_LEN 1056 OUTPUT_FILE jp_PulDLeP.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 297 1043 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1044 297 1053 H SPACE SUB_CHARS 1 1044 297 1053 E SPACE SUB_CHARS 1 1044 297 1053 - SPACE STRAND 4 1047 4 COLOUR_TEXT_REGION 4 1047 4 1047 51 STRAND 10 1047 13 COLOUR_TEXT_REGION 10 1047 13 1047 51 STRAND 20 1047 24 COLOUR_TEXT_REGION 20 1047 24 1047 51 STRAND 29 1047 36 COLOUR_TEXT_REGION 29 1047 36 1047 51 STRAND 63 1047 66 COLOUR_TEXT_REGION 63 1047 66 1047 51 STRAND 74 1047 82 COLOUR_TEXT_REGION 74 1047 82 1047 51 STRAND 88 1047 92 COLOUR_TEXT_REGION 88 1047 92 1047 51 STRAND 107 1047 112 COLOUR_TEXT_REGION 107 1047 112 1047 51 STRAND 117 1047 120 COLOUR_TEXT_REGION 117 1047 120 1047 51 STRAND 125 1047 127 COLOUR_TEXT_REGION 125 1047 127 1047 51 STRAND 134 1047 137 COLOUR_TEXT_REGION 134 1047 137 1047 51 STRAND 166 1047 173 COLOUR_TEXT_REGION 166 1047 173 1047 51 STRAND 177 1047 181 COLOUR_TEXT_REGION 177 1047 181 1047 51 STRAND 192 1047 198 COLOUR_TEXT_REGION 192 1047 198 1047 51 STRAND 202 1047 210 COLOUR_TEXT_REGION 202 1047 210 1047 51 STRAND 219 1047 220 COLOUR_TEXT_REGION 219 1047 220 1047 51 STRAND 226 1047 231 COLOUR_TEXT_REGION 226 1047 231 1047 51 STRAND 271 1047 275 COLOUR_TEXT_REGION 271 1047 275 1047 51 STRAND 281 1047 287 COLOUR_TEXT_REGION 281 1047 287 1047 51 HELIX 235 1047 253 COLOUR_TEXT_REGION 235 1047 253 1047 50 HELIX 258 1047 267 COLOUR_TEXT_REGION 258 1047 267 1047 50 HELIX 291 1047 292 COLOUR_TEXT_REGION 291 1047 292 1047 50 STRAND 11 1052 13 COLOUR_TEXT_REGION 11 1052 13 1052 51 STRAND 21 1052 24 COLOUR_TEXT_REGION 21 1052 24 1052 51 STRAND 29 1052 36 COLOUR_TEXT_REGION 29 1052 36 1052 51 STRAND 63 1052 66 COLOUR_TEXT_REGION 63 1052 66 1052 51 STRAND 74 1052 83 COLOUR_TEXT_REGION 74 1052 83 1052 51 STRAND 88 1052 92 COLOUR_TEXT_REGION 88 1052 92 1052 51 STRAND 108 1052 113 COLOUR_TEXT_REGION 108 1052 113 1052 51 STRAND 117 1052 120 COLOUR_TEXT_REGION 117 1052 120 1052 51 STRAND 125 1052 127 COLOUR_TEXT_REGION 125 1052 127 1052 51 STRAND 134 1052 137 COLOUR_TEXT_REGION 134 1052 137 1052 51 STRAND 166 1052 173 COLOUR_TEXT_REGION 166 1052 173 1052 51 STRAND 177 1052 180 COLOUR_TEXT_REGION 177 1052 180 1052 51 STRAND 191 1052 199 COLOUR_TEXT_REGION 191 1052 199 1052 51 STRAND 202 1052 210 COLOUR_TEXT_REGION 202 1052 210 1052 51 STRAND 219 1052 220 COLOUR_TEXT_REGION 219 1052 220 1052 51 STRAND 225 1052 231 COLOUR_TEXT_REGION 225 1052 231 1052 51 STRAND 271 1052 275 COLOUR_TEXT_REGION 271 1052 275 1052 51 STRAND 281 1052 287 COLOUR_TEXT_REGION 281 1052 287 1052 51 HELIX 235 1052 253 COLOUR_TEXT_REGION 235 1052 253 1052 50 HELIX 258 1052 266 COLOUR_TEXT_REGION 258 1052 266 1052 50 HELIX 291 1052 292 COLOUR_TEXT_REGION 291 1052 292 1052 50 STRAND 3 1053 4 COLOUR_TEXT_REGION 3 1053 4 1053 51 STRAND 9 1053 14 COLOUR_TEXT_REGION 9 1053 14 1053 51 STRAND 20 1053 24 COLOUR_TEXT_REGION 20 1053 24 1053 51 STRAND 29 1053 35 COLOUR_TEXT_REGION 29 1053 35 1053 51 STRAND 64 1053 66 COLOUR_TEXT_REGION 64 1053 66 1053 51 STRAND 74 1053 82 COLOUR_TEXT_REGION 74 1053 82 1053 51 STRAND 88 1053 92 COLOUR_TEXT_REGION 88 1053 92 1053 51 STRAND 107 1053 112 COLOUR_TEXT_REGION 107 1053 112 1053 51 STRAND 117 1053 120 COLOUR_TEXT_REGION 117 1053 120 1053 51 STRAND 125 1053 127 COLOUR_TEXT_REGION 125 1053 127 1053 51 STRAND 134 1053 137 COLOUR_TEXT_REGION 134 1053 137 1053 51 STRAND 166 1053 173 COLOUR_TEXT_REGION 166 1053 173 1053 51 STRAND 177 1053 181 COLOUR_TEXT_REGION 177 1053 181 1053 51 STRAND 192 1053 197 COLOUR_TEXT_REGION 192 1053 197 1053 51 STRAND 201 1053 209 COLOUR_TEXT_REGION 201 1053 209 1053 51 STRAND 219 1053 221 COLOUR_TEXT_REGION 219 1053 221 1053 51 STRAND 226 1053 230 COLOUR_TEXT_REGION 226 1053 230 1053 51 STRAND 271 1053 275 COLOUR_TEXT_REGION 271 1053 275 1053 51 STRAND 281 1053 287 COLOUR_TEXT_REGION 281 1053 287 1053 51 HELIX 235 1053 253 COLOUR_TEXT_REGION 235 1053 253 1053 50 HELIX 258 1053 268 COLOUR_TEXT_REGION 258 1053 268 1053 50 HELIX 291 1053 293 COLOUR_TEXT_REGION 291 1053 293 1053 50