SILENT_MODE BLOCK_FILE jp_dwbeEyu.concise.blc MAX_NSEQ 246 MAX_INPUT_LEN 248 OUTPUT_FILE jp_dwbeEyu.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 195 235 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 236 195 245 H SPACE SUB_CHARS 1 236 195 245 E SPACE SUB_CHARS 1 236 195 245 - SPACE STRAND 31 239 36 COLOUR_TEXT_REGION 31 239 36 239 51 STRAND 42 239 48 COLOUR_TEXT_REGION 42 239 48 239 51 STRAND 53 239 58 COLOUR_TEXT_REGION 53 239 58 239 51 STRAND 62 239 67 COLOUR_TEXT_REGION 62 239 67 239 51 STRAND 70 239 75 COLOUR_TEXT_REGION 70 239 75 239 51 STRAND 103 239 110 COLOUR_TEXT_REGION 103 239 110 239 51 STRAND 115 239 127 COLOUR_TEXT_REGION 115 239 127 239 51 STRAND 132 239 134 COLOUR_TEXT_REGION 132 239 134 239 51 STRAND 140 239 151 COLOUR_TEXT_REGION 140 239 151 239 51 STRAND 157 239 165 COLOUR_TEXT_REGION 157 239 165 239 51 STRAND 170 239 177 COLOUR_TEXT_REGION 170 239 177 239 51 STRAND 184 239 190 COLOUR_TEXT_REGION 184 239 190 239 51 HELIX 3 239 13 COLOUR_TEXT_REGION 3 239 13 239 50 HELIX 21 239 26 COLOUR_TEXT_REGION 21 239 26 239 50 STRAND 31 244 36 COLOUR_TEXT_REGION 31 244 36 244 51 STRAND 42 244 48 COLOUR_TEXT_REGION 42 244 48 244 51 STRAND 53 244 58 COLOUR_TEXT_REGION 53 244 58 244 51 STRAND 62 244 67 COLOUR_TEXT_REGION 62 244 67 244 51 STRAND 70 244 75 COLOUR_TEXT_REGION 70 244 75 244 51 STRAND 103 244 110 COLOUR_TEXT_REGION 103 244 110 244 51 STRAND 115 244 127 COLOUR_TEXT_REGION 115 244 127 244 51 STRAND 132 244 134 COLOUR_TEXT_REGION 132 244 134 244 51 STRAND 139 244 151 COLOUR_TEXT_REGION 139 244 151 244 51 STRAND 157 244 165 COLOUR_TEXT_REGION 157 244 165 244 51 STRAND 170 244 177 COLOUR_TEXT_REGION 170 244 177 244 51 STRAND 184 244 189 COLOUR_TEXT_REGION 184 244 189 244 51 HELIX 3 244 12 COLOUR_TEXT_REGION 3 244 12 244 50 HELIX 21 244 26 COLOUR_TEXT_REGION 21 244 26 244 50 STRAND 31 245 36 COLOUR_TEXT_REGION 31 245 36 245 51 STRAND 41 245 49 COLOUR_TEXT_REGION 41 245 49 245 51 STRAND 54 245 58 COLOUR_TEXT_REGION 54 245 58 245 51 STRAND 63 245 67 COLOUR_TEXT_REGION 63 245 67 245 51 STRAND 70 245 75 COLOUR_TEXT_REGION 70 245 75 245 51 STRAND 103 245 110 COLOUR_TEXT_REGION 103 245 110 245 51 STRAND 115 245 127 COLOUR_TEXT_REGION 115 245 127 245 51 STRAND 132 245 134 COLOUR_TEXT_REGION 132 245 134 245 51 STRAND 141 245 151 COLOUR_TEXT_REGION 141 245 151 245 51 STRAND 157 245 164 COLOUR_TEXT_REGION 157 245 164 245 51 STRAND 170 245 177 COLOUR_TEXT_REGION 170 245 177 245 51 STRAND 184 245 190 COLOUR_TEXT_REGION 184 245 190 245 51 HELIX 3 245 13 COLOUR_TEXT_REGION 3 245 13 245 50 HELIX 21 245 26 COLOUR_TEXT_REGION 21 245 26 245 50