SILENT_MODE
BLOCK_FILE jp_ZGIu3mG.concise.blc
MAX_NSEQ 66
MAX_INPUT_LEN 68
OUTPUT_FILE jp_ZGIu3mG.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 109 55   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 56 109 65 H SPACE
SUB_CHARS 1 56 109 65 E SPACE
SUB_CHARS 1 56 109 65 - SPACE
STRAND 17 59 23
COLOUR_TEXT_REGION 17 59 23 59 51
STRAND 40 59 43
COLOUR_TEXT_REGION 40 59 43 59 51
STRAND 64 59 69
COLOUR_TEXT_REGION 64 59 69 59 51
STRAND 74 59 80
COLOUR_TEXT_REGION 74 59 80 59 51
STRAND 102 59 108
COLOUR_TEXT_REGION 102 59 108 59 51
HELIX 3 59 5
COLOUR_TEXT_REGION 3 59 5 59 50
HELIX 27 59 35
COLOUR_TEXT_REGION 27 59 35 59 50
HELIX 46 59 55
COLOUR_TEXT_REGION 46 59 55 59 50
HELIX 92 59 97
COLOUR_TEXT_REGION 92 59 97 59 50
STRAND 0 64 4
COLOUR_TEXT_REGION 0 64 4 64 51
STRAND 17 64 23
COLOUR_TEXT_REGION 17 64 23 64 51
STRAND 40 64 43
COLOUR_TEXT_REGION 40 64 43 64 51
STRAND 65 64 69
COLOUR_TEXT_REGION 65 64 69 64 51
STRAND 74 64 80
COLOUR_TEXT_REGION 74 64 80 64 51
STRAND 102 64 107
COLOUR_TEXT_REGION 102 64 107 64 51
HELIX 5 64 5
COLOUR_TEXT_REGION 5 64 5 64 50
HELIX 27 64 35
COLOUR_TEXT_REGION 27 64 35 64 50
HELIX 46 64 55
COLOUR_TEXT_REGION 46 64 55 64 50
HELIX 92 64 98
COLOUR_TEXT_REGION 92 64 98 64 50
STRAND 17 65 24
COLOUR_TEXT_REGION 17 65 24 65 51
STRAND 39 65 43
COLOUR_TEXT_REGION 39 65 43 65 51
STRAND 61 65 61
COLOUR_TEXT_REGION 61 65 61 65 51
STRAND 64 65 70
COLOUR_TEXT_REGION 64 65 70 65 51
STRAND 74 65 80
COLOUR_TEXT_REGION 74 65 80 65 51
STRAND 101 65 108
COLOUR_TEXT_REGION 101 65 108 65 51
HELIX 3 65 5
COLOUR_TEXT_REGION 3 65 5 65 50
HELIX 27 65 34
COLOUR_TEXT_REGION 27 65 34 65 50
HELIX 45 65 55
COLOUR_TEXT_REGION 45 65 55 65 50
HELIX 92 65 97
COLOUR_TEXT_REGION 92 65 97 65 50