SILENT_MODE BLOCK_FILE jp_mOMyX7K.concise.blc MAX_NSEQ 1364 MAX_INPUT_LEN 1366 OUTPUT_FILE jp_mOMyX7K.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 129 1353 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1354 129 1363 H SPACE SUB_CHARS 1 1354 129 1363 E SPACE SUB_CHARS 1 1354 129 1363 - SPACE STRAND 53 1357 57 COLOUR_TEXT_REGION 53 1357 57 1357 51 STRAND 62 1357 66 COLOUR_TEXT_REGION 62 1357 66 1357 51 STRAND 86 1357 86 COLOUR_TEXT_REGION 86 1357 86 1357 51 STRAND 90 1357 96 COLOUR_TEXT_REGION 90 1357 96 1357 51 STRAND 102 1357 110 COLOUR_TEXT_REGION 102 1357 110 1357 51 STRAND 116 1357 125 COLOUR_TEXT_REGION 116 1357 125 1357 51 HELIX 2 1357 21 COLOUR_TEXT_REGION 2 1357 21 1357 50 HELIX 24 1357 30 COLOUR_TEXT_REGION 24 1357 30 1357 50 HELIX 36 1357 48 COLOUR_TEXT_REGION 36 1357 48 1357 50 HELIX 83 1357 85 COLOUR_TEXT_REGION 83 1357 85 1357 50 STRAND 53 1362 57 COLOUR_TEXT_REGION 53 1362 57 1362 51 STRAND 62 1362 66 COLOUR_TEXT_REGION 62 1362 66 1362 51 STRAND 90 1362 96 COLOUR_TEXT_REGION 90 1362 96 1362 51 STRAND 102 1362 110 COLOUR_TEXT_REGION 102 1362 110 1362 51 STRAND 116 1362 125 COLOUR_TEXT_REGION 116 1362 125 1362 51 HELIX 2 1362 21 COLOUR_TEXT_REGION 2 1362 21 1362 50 HELIX 24 1362 30 COLOUR_TEXT_REGION 24 1362 30 1362 50 HELIX 35 1362 48 COLOUR_TEXT_REGION 35 1362 48 1362 50 HELIX 82 1362 86 COLOUR_TEXT_REGION 82 1362 86 1362 50 STRAND 53 1363 57 COLOUR_TEXT_REGION 53 1363 57 1363 51 STRAND 62 1363 67 COLOUR_TEXT_REGION 62 1363 67 1363 51 STRAND 84 1363 87 COLOUR_TEXT_REGION 84 1363 87 1363 51 STRAND 90 1363 96 COLOUR_TEXT_REGION 90 1363 96 1363 51 STRAND 102 1363 110 COLOUR_TEXT_REGION 102 1363 110 1363 51 STRAND 116 1363 125 COLOUR_TEXT_REGION 116 1363 125 1363 51 HELIX 3 1363 21 COLOUR_TEXT_REGION 3 1363 21 1363 50 HELIX 24 1363 31 COLOUR_TEXT_REGION 24 1363 31 1363 50 HELIX 36 1363 48 COLOUR_TEXT_REGION 36 1363 48 1363 50