SILENT_MODE BLOCK_FILE jp_KUW5uUW.concise.blc MAX_NSEQ 856 MAX_INPUT_LEN 858 OUTPUT_FILE jp_KUW5uUW.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 149 845 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 846 149 855 H SPACE SUB_CHARS 1 846 149 855 E SPACE SUB_CHARS 1 846 149 855 - SPACE STRAND 7 849 14 COLOUR_TEXT_REGION 7 849 14 849 51 STRAND 19 849 23 COLOUR_TEXT_REGION 19 849 23 849 51 STRAND 28 849 35 COLOUR_TEXT_REGION 28 849 35 849 51 STRAND 40 849 43 COLOUR_TEXT_REGION 40 849 43 849 51 STRAND 49 849 57 COLOUR_TEXT_REGION 49 849 57 849 51 STRAND 61 849 64 COLOUR_TEXT_REGION 61 849 64 849 51 STRAND 71 849 76 COLOUR_TEXT_REGION 71 849 76 849 51 STRAND 81 849 84 COLOUR_TEXT_REGION 81 849 84 849 51 STRAND 90 849 97 COLOUR_TEXT_REGION 90 849 97 849 51 STRAND 101 849 104 COLOUR_TEXT_REGION 101 849 104 849 51 STRAND 110 849 118 COLOUR_TEXT_REGION 110 849 118 849 51 STRAND 123 849 126 COLOUR_TEXT_REGION 123 849 126 849 51 STRAND 131 849 140 COLOUR_TEXT_REGION 131 849 140 849 51 STRAND 145 849 148 COLOUR_TEXT_REGION 145 849 148 849 51 STRAND 7 854 14 COLOUR_TEXT_REGION 7 854 14 854 51 STRAND 19 854 22 COLOUR_TEXT_REGION 19 854 22 854 51 STRAND 28 854 35 COLOUR_TEXT_REGION 28 854 35 854 51 STRAND 40 854 43 COLOUR_TEXT_REGION 40 854 43 854 51 STRAND 49 854 56 COLOUR_TEXT_REGION 49 854 56 854 51 STRAND 61 854 64 COLOUR_TEXT_REGION 61 854 64 854 51 STRAND 70 854 76 COLOUR_TEXT_REGION 70 854 76 854 51 STRAND 81 854 84 COLOUR_TEXT_REGION 81 854 84 854 51 STRAND 90 854 97 COLOUR_TEXT_REGION 90 854 97 854 51 STRAND 101 854 104 COLOUR_TEXT_REGION 101 854 104 854 51 STRAND 109 854 118 COLOUR_TEXT_REGION 109 854 118 854 51 STRAND 123 854 126 COLOUR_TEXT_REGION 123 854 126 854 51 STRAND 131 854 140 COLOUR_TEXT_REGION 131 854 140 854 51 STRAND 145 854 148 COLOUR_TEXT_REGION 145 854 148 854 51 STRAND 8 855 15 COLOUR_TEXT_REGION 8 855 15 855 51 STRAND 19 855 23 COLOUR_TEXT_REGION 19 855 23 855 51 STRAND 28 855 36 COLOUR_TEXT_REGION 28 855 36 855 51 STRAND 40 855 44 COLOUR_TEXT_REGION 40 855 44 855 51 STRAND 52 855 57 COLOUR_TEXT_REGION 52 855 57 855 51 STRAND 61 855 64 COLOUR_TEXT_REGION 61 855 64 855 51 STRAND 81 855 84 COLOUR_TEXT_REGION 81 855 84 855 51 STRAND 92 855 97 COLOUR_TEXT_REGION 92 855 97 855 51 STRAND 101 855 105 COLOUR_TEXT_REGION 101 855 105 855 51 STRAND 110 855 118 COLOUR_TEXT_REGION 110 855 118 855 51 STRAND 123 855 126 COLOUR_TEXT_REGION 123 855 126 855 51 STRAND 131 855 134 COLOUR_TEXT_REGION 131 855 134 855 51 STRAND 136 855 140 COLOUR_TEXT_REGION 136 855 140 855 51 STRAND 145 855 148 COLOUR_TEXT_REGION 145 855 148 855 51