SILENT_MODE BLOCK_FILE jp_2sQbBFr.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_2sQbBFr.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 98 21 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 22 98 31 H SPACE SUB_CHARS 1 22 98 31 E SPACE SUB_CHARS 1 22 98 31 - SPACE STRAND 4 25 7 COLOUR_TEXT_REGION 4 25 7 25 51 STRAND 16 25 16 COLOUR_TEXT_REGION 16 25 16 25 51 STRAND 26 25 33 COLOUR_TEXT_REGION 26 25 33 25 51 STRAND 38 25 44 COLOUR_TEXT_REGION 38 25 44 25 51 STRAND 49 25 53 COLOUR_TEXT_REGION 49 25 53 25 51 STRAND 59 25 63 COLOUR_TEXT_REGION 59 25 63 25 51 STRAND 69 25 76 COLOUR_TEXT_REGION 69 25 76 25 51 STRAND 95 25 96 COLOUR_TEXT_REGION 95 25 96 25 51 HELIX 21 25 23 COLOUR_TEXT_REGION 21 25 23 25 50 HELIX 82 25 94 COLOUR_TEXT_REGION 82 25 94 25 50 STRAND 4 30 7 COLOUR_TEXT_REGION 4 30 7 30 51 STRAND 15 30 16 COLOUR_TEXT_REGION 15 30 16 30 51 STRAND 27 30 33 COLOUR_TEXT_REGION 27 30 33 30 51 STRAND 38 30 44 COLOUR_TEXT_REGION 38 30 44 30 51 STRAND 49 30 53 COLOUR_TEXT_REGION 49 30 53 30 51 STRAND 59 30 63 COLOUR_TEXT_REGION 59 30 63 30 51 STRAND 69 30 76 COLOUR_TEXT_REGION 69 30 76 30 51 STRAND 95 30 96 COLOUR_TEXT_REGION 95 30 96 30 51 HELIX 21 30 26 COLOUR_TEXT_REGION 21 30 26 30 50 HELIX 82 30 82 COLOUR_TEXT_REGION 82 30 82 30 50 HELIX 84 30 94 COLOUR_TEXT_REGION 84 30 94 30 50 STRAND 3 31 8 COLOUR_TEXT_REGION 3 31 8 31 51 STRAND 16 31 16 COLOUR_TEXT_REGION 16 31 16 31 51 STRAND 26 31 33 COLOUR_TEXT_REGION 26 31 33 31 51 STRAND 38 31 44 COLOUR_TEXT_REGION 38 31 44 31 51 STRAND 49 31 54 COLOUR_TEXT_REGION 49 31 54 31 51 STRAND 59 31 63 COLOUR_TEXT_REGION 59 31 63 31 51 STRAND 69 31 76 COLOUR_TEXT_REGION 69 31 76 31 51 STRAND 94 31 96 COLOUR_TEXT_REGION 94 31 96 31 51 HELIX 81 31 93 COLOUR_TEXT_REGION 81 31 93 31 50