QUERY                  : DMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEALVKAL : QUERY 
UniRef90_M7CCD0        : DMLDFATAKLNLDKSLSQLAAVPDVTAKVEAQINIEAHEALVKAL : UniRef90_M7CCD0
UniRef90_UPI0003333F27 : DMLDLGVARANLEKAQAQLAGAADEPARAEAQILVEANEALVKAL : UniRef90_UPI0003333F27
UniRef90_U6IPP2        : ESIDSQLVRDNLAKAQSQLSSTSDEEKKVEAQIMVEAYESMLSAL : UniRef90_U6IPP2
UniRef90_F7E7B4        : DMLDLAVAKSNLEKANSELSGVSDEAARAEVLIRIEANEAIVKAL : UniRef90_F7E7B4
UniRef90_H2ZM25        : EQLDKELARANLSKAQSEFSSAATEVAKVEAQIAIECNEAIINAV : UniRef90_H2ZM25
UniRef90_C9W1P7        : DRLDPQLCRDGLTKAQQALQSASSDTARAEAQIEVEVHEALIKAL : UniRef90_C9W1P7
UniRef90_T1J226        : EQLDLQACREGLSSAQQQLTQASTDEAKAEAQINIEVHEALVKA- : UniRef90_T1J226
UniRef90_UPI0003F0628A : DLLDVGTARANLEMAQAELAGAVDEAQRTEIQIRNEASEVLVKAL : UniRef90_UPI0003F0628A
UniRef90_UPI0003D0C165 : DMLDLAAAKSNLEKALSELMAAPDEVAKAEAQIKVEANEALVKAL : UniRef90_UPI0003D0C165
UniRef90_H3AN07        : EHLDLATAKANLDKALSELLGTSNEAERAEAQITVDANEAIVKAL : UniRef90_H3AN07
UniRef90_V5I9G1        : ENLDVSAARDILSKAQSQLSSASTDEARAEAQIAVEVGEALVKA- : UniRef90_V5I9G1
UniRef90_UPI0003C44E1B : -----ATKYFDLDKALPPLAAAPDETAKVEAQIHVEASEALVKAL : UniRef90_UPI0003C44E1B
UniRef90_UPI00035A14C4 : DRLDAAAIREGFSKAQQELSSASSETAKAEAQIALECYEALQKAL : UniRef90_UPI00035A14C4
UniRef90_V4A9S2        : ENFDAGAVRDGLAKAQSAMSSASTEQQKAEAQIAVECYEALSKAI : UniRef90_V4A9S2
UniRef90_G7YDW7        : DQLDVHAVKEGLTRAQAELLSAQTDASKAEAQIAVEVYEELAHA- : UniRef90_G7YDW7
UniRef90_Q3KTI0        : DQLDLQAVKDGVSRAQSELSTANTEVGKTEAQIAIEAFEEMSRAL : UniRef90_Q3KTI0
UniRef90_D7NXZ9        : DMLDLGAAKANLEKAHSELSGAADEAARAEIQ------------- : UniRef90_D7NXZ9
UniRef90_U4U0R7        : ENIDASAARELLTKSQSQLSSAANDQAKAEAEIAVEVSEALVKA- : UniRef90_U4U0R7
UniRef90_H9KJN2        : ENLDSSAIRELLSKAQQELSSATTEEDKAAATIAIEVSEALVQAV : UniRef90_H9KJN2
UniRef90_E2A9J2        : ENIDSSAARDILTKAQQQLSSATTDKDKAEAAIAVEVGEALVQA- : UniRef90_E2A9J2
UniRef90_Q4PM55        : DRLDAQACREGLAKAQQAVTAAATDEARAEAQIEVEVHEALVKAI : UniRef90_Q4PM55
UniRef90_R7UR95        : EHLDSQAAREGLSLAQQEAASASTEQAKAEAQIAVECFEEVIK-- : UniRef90_R7UR95
UniRef90_H9LFA4        : EDLDLASARDLLSKAQSEANAAGTEEAKAQALIAVEVAEELVKA- : UniRef90_H9LFA4
UniRef90_T1EMJ4        : DHLDAQAIRDGATSAAQDLLSASSEQSKAEAQIALECYDALQKAV : UniRef90_T1EMJ4
UniRef90_Q012G4        : EQLDPEAVKKGLAEHQAKFANAKDDVEKAHAQIGIDCCNAMVSAI : UniRef90_Q012G4
UniRef90_Q7PNG6        : EDLDSSACRELLSNAQTQLSSASGDKDRAEAAIAMEVAEALVKA- : UniRef90_Q7PNG6
UniRef90_M8A3M2        : DQIDQSLVQKGLAEFTAKLGSASTDLEKAEAQIGVDVHSALSAAL : UniRef90_M8A3M2
UniRef90_T1P9C0        : --IDVNEARQLLSQYQSALSSASSDEAKAEAAIAVECCEALIKA- : UniRef90_T1P9C0
UniRef90_T1KH68        : DFLDVNAARDALKDAQTDESKASSPEEKAAAQVAVEVSEAIIKAI : UniRef90_T1KH68
UniRef90_L8H026        : DQLDPEKAKKGLEDFTKELASASDAEAKTVATIGVEVYKAMCSAL : UniRef90_L8H026

                       : 1---------11--------21--------31--------41--- :
OrigSeq                : DMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEALVKAL : OrigSeq

Jnet                   : ----HHHHHHHHHHHHHHHH----HHHHHEEEEEHHHHHHHHH-- : Jnet
jhmm                   : ----HHHHHHHHHHHHHHHH----HHHHHEEEEEHHHHHHHHH-- : jhmm
jpssm                  : ----HHHHHH-HHHHHHHH------HHHEEEEEEEHHHHHHH--- : jpssm

Lupas 14               : ----CCCCCCCCCCCCCCccccccc-------------------- : Lupas 14
Lupas 21               : ----CCCCCCCCCCCCCCCCCCCCCCCCCCCC------------- : Lupas 21
Lupas 28               : -cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------ : Lupas 28

Jnet_25                : --B---BB---B--BB--B--B------B-B-BBB-BB-BBB-B- : Jnet_25
Jnet_5                 : -------B---B------------------B-B---B---BB--- : Jnet_5
Jnet_0                 : ------------------------------------B-------- : Jnet_0
Jnet Rel               : 998278775342899987517875222113455412678765269 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.