SILENT_MODE
BLOCK_FILE jp_9xqNKmr.concise.blc
MAX_NSEQ 151
MAX_INPUT_LEN 153
OUTPUT_FILE jp_9xqNKmr.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 59 140   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 141 59 150 H SPACE
SUB_CHARS 1 141 59 150 E SPACE
SUB_CHARS 1 141 59 150 - SPACE
STRAND 3 144 4
COLOUR_TEXT_REGION 3 144 4 144 51
STRAND 10 144 12
COLOUR_TEXT_REGION 10 144 12 144 51
STRAND 15 144 17
COLOUR_TEXT_REGION 15 144 17 144 51
STRAND 29 144 32
COLOUR_TEXT_REGION 29 144 32 144 51
STRAND 36 144 48
COLOUR_TEXT_REGION 36 144 48 144 51
STRAND 51 144 56
COLOUR_TEXT_REGION 51 144 56 144 51
STRAND 2 149 4
COLOUR_TEXT_REGION 2 149 4 149 51
STRAND 10 149 12
COLOUR_TEXT_REGION 10 149 12 149 51
STRAND 16 149 17
COLOUR_TEXT_REGION 16 149 17 149 51
STRAND 23 149 23
COLOUR_TEXT_REGION 23 149 23 149 51
STRAND 29 149 32
COLOUR_TEXT_REGION 29 149 32 149 51
STRAND 36 149 48
COLOUR_TEXT_REGION 36 149 48 149 51
STRAND 51 149 56
COLOUR_TEXT_REGION 51 149 56 149 51
STRAND 3 150 4
COLOUR_TEXT_REGION 3 150 4 150 51
STRAND 10 150 12
COLOUR_TEXT_REGION 10 150 12 150 51
STRAND 15 150 18
COLOUR_TEXT_REGION 15 150 18 150 51
STRAND 29 150 32
COLOUR_TEXT_REGION 29 150 32 150 51
STRAND 36 150 48
COLOUR_TEXT_REGION 36 150 48 150 51
STRAND 51 150 56
COLOUR_TEXT_REGION 51 150 56 150 51