SILENT_MODE
BLOCK_FILE jp_sK02WZ9.concise.blc
MAX_NSEQ 401
MAX_INPUT_LEN 403
OUTPUT_FILE jp_sK02WZ9.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 140 390   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 391 140 400 H SPACE
SUB_CHARS 1 391 140 400 E SPACE
SUB_CHARS 1 391 140 400 - SPACE
STRAND 33 394 37
COLOUR_TEXT_REGION 33 394 37 394 51
STRAND 51 394 52
COLOUR_TEXT_REGION 51 394 52 394 51
HELIX 6 394 11
COLOUR_TEXT_REGION 6 394 11 394 50
HELIX 16 394 26
COLOUR_TEXT_REGION 16 394 26 394 50
HELIX 57 394 65
COLOUR_TEXT_REGION 57 394 65 394 50
HELIX 71 394 82
COLOUR_TEXT_REGION 71 394 82 394 50
HELIX 88 394 92
COLOUR_TEXT_REGION 88 394 92 394 50
HELIX 96 394 110
COLOUR_TEXT_REGION 96 394 110 394 50
HELIX 116 394 124
COLOUR_TEXT_REGION 116 394 124 394 50
HELIX 131 394 138
COLOUR_TEXT_REGION 131 394 138 394 50
STRAND 33 399 36
COLOUR_TEXT_REGION 33 399 36 399 51
STRAND 51 399 52
COLOUR_TEXT_REGION 51 399 52 399 51
HELIX 6 399 11
COLOUR_TEXT_REGION 6 399 11 399 50
HELIX 16 399 25
COLOUR_TEXT_REGION 16 399 25 399 50
HELIX 57 399 64
COLOUR_TEXT_REGION 57 399 64 399 50
HELIX 71 399 82
COLOUR_TEXT_REGION 71 399 82 399 50
HELIX 88 399 92
COLOUR_TEXT_REGION 88 399 92 399 50
HELIX 96 399 110
COLOUR_TEXT_REGION 96 399 110 399 50
HELIX 116 399 124
COLOUR_TEXT_REGION 116 399 124 399 50
HELIX 131 399 138
COLOUR_TEXT_REGION 131 399 138 399 50
STRAND 33 400 38
COLOUR_TEXT_REGION 33 400 38 400 51
STRAND 51 400 52
COLOUR_TEXT_REGION 51 400 52 400 51
HELIX 6 400 11
COLOUR_TEXT_REGION 6 400 11 400 50
HELIX 16 400 26
COLOUR_TEXT_REGION 16 400 26 400 50
HELIX 57 400 66
COLOUR_TEXT_REGION 57 400 66 400 50
HELIX 69 400 82
COLOUR_TEXT_REGION 69 400 82 400 50
HELIX 89 400 91
COLOUR_TEXT_REGION 89 400 91 400 50
HELIX 96 400 109
COLOUR_TEXT_REGION 96 400 109 400 50
HELIX 116 400 124
COLOUR_TEXT_REGION 116 400 124 400 50
HELIX 131 400 137
COLOUR_TEXT_REGION 131 400 137 400 50