SILENT_MODE BLOCK_FILE jp_f0JMmVg.concise.blc MAX_NSEQ 855 MAX_INPUT_LEN 857 OUTPUT_FILE jp_f0JMmVg.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 187 844 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 845 187 854 H SPACE SUB_CHARS 1 845 187 854 E SPACE SUB_CHARS 1 845 187 854 - SPACE STRAND 16 848 21 COLOUR_TEXT_REGION 16 848 21 848 51 STRAND 40 848 43 COLOUR_TEXT_REGION 40 848 43 848 51 STRAND 69 848 72 COLOUR_TEXT_REGION 69 848 72 848 51 STRAND 89 848 95 COLOUR_TEXT_REGION 89 848 95 848 51 STRAND 123 848 129 COLOUR_TEXT_REGION 123 848 129 848 51 STRAND 134 848 140 COLOUR_TEXT_REGION 134 848 140 848 51 STRAND 167 848 172 COLOUR_TEXT_REGION 167 848 172 848 51 HELIX 47 848 55 COLOUR_TEXT_REGION 47 848 55 848 50 HELIX 100 848 112 COLOUR_TEXT_REGION 100 848 112 848 50 HELIX 145 848 159 COLOUR_TEXT_REGION 145 848 159 848 50 HELIX 175 848 177 COLOUR_TEXT_REGION 175 848 177 848 50 STRAND 16 853 21 COLOUR_TEXT_REGION 16 853 21 853 51 STRAND 40 853 44 COLOUR_TEXT_REGION 40 853 44 853 51 STRAND 69 853 72 COLOUR_TEXT_REGION 69 853 72 853 51 STRAND 90 853 95 COLOUR_TEXT_REGION 90 853 95 853 51 STRAND 122 853 129 COLOUR_TEXT_REGION 122 853 129 853 51 STRAND 134 853 140 COLOUR_TEXT_REGION 134 853 140 853 51 STRAND 167 853 172 COLOUR_TEXT_REGION 167 853 172 853 51 HELIX 32 853 35 COLOUR_TEXT_REGION 32 853 35 853 50 HELIX 47 853 55 COLOUR_TEXT_REGION 47 853 55 853 50 HELIX 100 853 112 COLOUR_TEXT_REGION 100 853 112 853 50 HELIX 146 853 159 COLOUR_TEXT_REGION 146 853 159 853 50 HELIX 175 853 178 COLOUR_TEXT_REGION 175 853 178 853 50 STRAND 15 854 21 COLOUR_TEXT_REGION 15 854 21 854 51 STRAND 69 854 72 COLOUR_TEXT_REGION 69 854 72 854 51 STRAND 77 854 79 COLOUR_TEXT_REGION 77 854 79 854 51 STRAND 88 854 94 COLOUR_TEXT_REGION 88 854 94 854 51 STRAND 124 854 129 COLOUR_TEXT_REGION 124 854 129 854 51 STRAND 134 854 140 COLOUR_TEXT_REGION 134 854 140 854 51 STRAND 167 854 172 COLOUR_TEXT_REGION 167 854 172 854 51 HELIX 44 854 55 COLOUR_TEXT_REGION 44 854 55 854 50 HELIX 101 854 112 COLOUR_TEXT_REGION 101 854 112 854 50 HELIX 145 854 159 COLOUR_TEXT_REGION 145 854 159 854 50 HELIX 174 854 177 COLOUR_TEXT_REGION 174 854 177 854 50